Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
IFNA1P01562 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC11.13□□□□□ -0.63
IFNA1P01562 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC11.13□□□□□ -0.63
IFNA1P01562 SNORA50C-201ENST00000408535 133 ntBASIC11.13□□□□□ -0.63
IFNA1P01562 SPDYE7P-202ENST00000420373 878 ntBASIC11.13□□□□□ -0.63
IFNA1P01562 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC11.13□□□□□ -0.63
IFNA1P01562 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC11.13□□□□□ -0.63
IFNA1P01562 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
IFNA1P01562 PNKD-204ENST00000436005 978 ntTSL 5 BASIC11.13□□□□□ -0.63
IFNA1P01562 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC11.13□□□□□ -0.63
IFNA1P01562 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC11.13□□□□□ -0.63
IFNA1P01562 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
IFNA1P01562 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC11.13□□□□□ -0.63
IFNA1P01562 SATB1-217ENST00000493952 626 ntTSL 3 BASIC11.13□□□□□ -0.63
IFNA1P01562 ALG3P1-201ENST00000508806 1114 ntBASIC11.13□□□□□ -0.63
IFNA1P01562 AL512361.1-201ENST00000554200 418 ntBASIC11.13□□□□□ -0.63
IFNA1P01562 AC036164.1-201ENST00000570544 333 ntBASIC11.13□□□□□ -0.63
IFNA1P01562 MIR4453-201ENST00000584019 89 ntBASIC11.13□□□□□ -0.63
IFNA1P01562 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
IFNA1P01562 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC11.13□□□□□ -0.63
IFNA1P01562 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
IFNA1P01562 AL049840.4-201ENST00000602422 811 ntBASIC11.13□□□□□ -0.63
IFNA1P01562 AL691432.3-201ENST00000621860 400 ntBASIC11.13□□□□□ -0.63
IFNA1P01562 SNORA50.1-201ENST00000628590 135 ntBASIC11.13□□□□□ -0.63
IFNA1P01562 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
IFNA1P01562 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC11.13□□□□□ -0.63
IFNA1P01562 EPN3-201ENST00000268933 4071 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
IFNA1P01562 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC11.13□□□□□ -0.63
IFNA1P01562 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC11.13□□□□□ -0.63
IFNA1P01562 XIRP1-202ENST00000396251 6040 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
IFNA1P01562 LPO-204ENST00000543544 2350 ntTSL 2 BASIC11.13□□□□□ -0.63
IFNA1P01562 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC11.13□□□□□ -0.63
IFNA1P01562 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
IFNA1P01562 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
IFNA1P01562 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
IFNA1P01562 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
IFNA1P01562 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
IFNA1P01562 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
IFNA1P01562 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
IFNA1P01562 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
IFNA1P01562 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC11.13□□□□□ -0.63
IFNA1P01562 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC11.13□□□□□ -0.63
IFNA1P01562 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC11.13□□□□□ -0.63
IFNA1P01562 GLUL-204ENST00000417584 4065 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
IFNA1P01562 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC11.13□□□□□ -0.63
IFNA1P01562 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
IFNA1P01562 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
IFNA1P01562 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
IFNA1P01562 FOXJ3-202ENST00000361776 5106 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
IFNA1P01562 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
IFNA1P01562 LONRF2-201ENST00000393437 13912 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
IFNA1P01562 DNMBP-201ENST00000324109 6400 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
IFNA1P01562 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
IFNA1P01562 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
IFNA1P01562 IFNAR2-205ENST00000404220 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
IFNA1P01562 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
IFNA1P01562 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
IFNA1P01562 MAMLD1-201ENST00000262858 4607 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
IFNA1P01562 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC11.12□□□□□ -0.63
IFNA1P01562 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC11.12□□□□□ -0.63
IFNA1P01562 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
IFNA1P01562 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
IFNA1P01562 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
IFNA1P01562 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC11.12□□□□□ -0.63
IFNA1P01562 NFASC-206ENST00000404076 5728 ntTSL 5 BASIC11.12□□□□□ -0.63
IFNA1P01562 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
IFNA1P01562 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
IFNA1P01562 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
IFNA1P01562 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
IFNA1P01562 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
IFNA1P01562 AL031432.4-201ENST00000641729 2190 ntBASIC11.12□□□□□ -0.63
IFNA1P01562 EPB41L4A-201ENST00000261486 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
IFNA1P01562 ALS2CL-201ENST00000318962 4741 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
IFNA1P01562 RNU1-114P-201ENST00000365297 166 ntBASIC11.12□□□□□ -0.63
IFNA1P01562 RN7SKP230-201ENST00000365642 335 ntBASIC11.12□□□□□ -0.63
IFNA1P01562 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
IFNA1P01562 IPPK-202ENST00000375522 882 ntTSL 3 BASIC11.12□□□□□ -0.63
IFNA1P01562 NAPB-201ENST00000377026 3837 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
IFNA1P01562 LBH-204ENST00000406087 559 ntTSL 4 BASIC11.12□□□□□ -0.63
IFNA1P01562 RPL37AP1-201ENST00000412502 279 ntBASIC11.12□□□□□ -0.63
IFNA1P01562 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC11.12□□□□□ -0.63
IFNA1P01562 AL591424.1-201ENST00000442569 1213 ntBASIC11.12□□□□□ -0.63
IFNA1P01562 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC11.12□□□□□ -0.63
IFNA1P01562 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC11.12□□□□□ -0.63
IFNA1P01562 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
IFNA1P01562 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC11.12□□□□□ -0.63
IFNA1P01562 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
IFNA1P01562 AC010336.2-201ENST00000564226 506 ntBASIC11.12□□□□□ -0.63
IFNA1P01562 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC11.12□□□□□ -0.63
IFNA1P01562 5S_rRNA.22-201ENST00000614916 106 ntBASIC11.12□□□□□ -0.63
IFNA1P01562 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
IFNA1P01562 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
IFNA1P01562 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
IFNA1P01562 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
IFNA1P01562 RIOK3-201ENST00000339486 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
IFNA1P01562 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
IFNA1P01562 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
IFNA1P01562 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
IFNA1P01562 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
IFNA1P01562 KRT8P28-201ENST00000433288 1390 ntBASIC11.12□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms