Protein–RNA interactions for Protein: Q9BY60

GABARAPL3, Gamma-aminobutyric acid receptor-associated protein-like 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL3Q9BY60 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC12.78□□□□□ -0.36
GABARAPL3Q9BY60 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GABARAPL3Q9BY60 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GABARAPL3Q9BY60 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GABARAPL3Q9BY60 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.78□□□□□ -0.36
GABARAPL3Q9BY60 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GABARAPL3Q9BY60 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GABARAPL3Q9BY60 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
GABARAPL3Q9BY60 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GABARAPL3Q9BY60 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
GABARAPL3Q9BY60 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC12.77□□□□□ -0.36
GABARAPL3Q9BY60 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
GABARAPL3Q9BY60 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC12.77□□□□□ -0.36
GABARAPL3Q9BY60 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
GABARAPL3Q9BY60 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.36
GABARAPL3Q9BY60 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
GABARAPL3Q9BY60 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.77□□□□□ -0.36
GABARAPL3Q9BY60 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
GABARAPL3Q9BY60 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
GABARAPL3Q9BY60 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC12.77□□□□□ -0.36
GABARAPL3Q9BY60 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
GABARAPL3Q9BY60 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 OR2R1P-201ENST00000441404 914 ntBASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 CR383656.12-201ENST00000549567 513 ntBASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 CALM1-205ENST00000553542 877 ntTSL 5 BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 C2orf69P2-201ENST00000562032 1123 ntBASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 AC140912.1-201ENST00000577171 1054 ntBASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 PPY2P-201ENST00000582808 702 ntBASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 AL139424.3-202ENST00000641619 917 ntBASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 LINC01815-202ENST00000641468 1409 ntBASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GABARAPL3Q9BY60 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
GABARAPL3Q9BY60 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
GABARAPL3Q9BY60 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
GABARAPL3Q9BY60 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
GABARAPL3Q9BY60 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
GABARAPL3Q9BY60 GDA-203ENST00000376986 1771 ntTSL 2 BASIC12.76□□□□□ -0.37
GABARAPL3Q9BY60 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GABARAPL3Q9BY60 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GABARAPL3Q9BY60 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.76□□□□□ -0.37
GABARAPL3Q9BY60 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
GABARAPL3Q9BY60 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC12.76□□□□□ -0.37
GABARAPL3Q9BY60 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
GABARAPL3Q9BY60 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
GABARAPL3Q9BY60 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
GABARAPL3Q9BY60 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.76□□□□□ -0.37
GABARAPL3Q9BY60 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
GABARAPL3Q9BY60 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GABARAPL3Q9BY60 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GABARAPL3Q9BY60 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GABARAPL3Q9BY60 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GABARAPL3Q9BY60 AC092933.1-201ENST00000393644 945 ntBASIC12.76□□□□□ -0.37
GABARAPL3Q9BY60 KRT18P36-201ENST00000411618 1276 ntBASIC12.76□□□□□ -0.37
GABARAPL3Q9BY60 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GABARAPL3Q9BY60 RNA5SP421-201ENST00000516864 134 ntBASIC12.76□□□□□ -0.37
GABARAPL3Q9BY60 CDK4-206ENST00000549606 558 ntTSL 2 BASIC12.76□□□□□ -0.37
GABARAPL3Q9BY60 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.76□□□□□ -0.37
GABARAPL3Q9BY60 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC12.76□□□□□ -0.37
GABARAPL3Q9BY60 AC106028.4-201ENST00000614509 607 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms