Protein–RNA interactions for Protein: Q9BQS8

FYCO1, FYVE and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 1,478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1Q9BQS8 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
FYCO1Q9BQS8 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FYCO1Q9BQS8 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FYCO1Q9BQS8 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
FYCO1Q9BQS8 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FYCO1Q9BQS8 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
FYCO1Q9BQS8 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
FYCO1Q9BQS8 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FYCO1Q9BQS8 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FYCO1Q9BQS8 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
FYCO1Q9BQS8 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
FYCO1Q9BQS8 FAM90A12P-201ENST00000519497 2375 ntBASIC21.11■□□□□ 0.97
FYCO1Q9BQS8 FAM90A24P-201ENST00000520792 2369 ntBASIC21.11■□□□□ 0.97
FYCO1Q9BQS8 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FYCO1Q9BQS8 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FYCO1Q9BQS8 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC21.11■□□□□ 0.97
FYCO1Q9BQS8 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
FYCO1Q9BQS8 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
FYCO1Q9BQS8 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC21.11■□□□□ 0.97
FYCO1Q9BQS8 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC21.11■□□□□ 0.97
FYCO1Q9BQS8 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
FYCO1Q9BQS8 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC21.11■□□□□ 0.97
FYCO1Q9BQS8 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC21.11■□□□□ 0.97
FYCO1Q9BQS8 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC21.11■□□□□ 0.97
FYCO1Q9BQS8 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FYCO1Q9BQS8 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
FYCO1Q9BQS8 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
FYCO1Q9BQS8 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FYCO1Q9BQS8 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC21.11■□□□□ 0.97
FYCO1Q9BQS8 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC21.11■□□□□ 0.97
FYCO1Q9BQS8 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC21.11■□□□□ 0.97
FYCO1Q9BQS8 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
FYCO1Q9BQS8 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FYCO1Q9BQS8 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FYCO1Q9BQS8 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 HNRNPA1P58-201ENST00000403629 610 ntBASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 IGHVII-74-1-201ENST00000517572 241 ntBASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 AC006116.2-201ENST00000589958 988 ntBASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 MDC1-209ENST00000613547 830 ntTSL 5 BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 MRFAP1L1-201ENST00000320848 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 AC139749.1-202ENST00000617529 3139 ntBASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FYCO1Q9BQS8 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FYCO1Q9BQS8 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC21.09■□□□□ 0.97
FYCO1Q9BQS8 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
FYCO1Q9BQS8 ENPP7P8-202ENST00000527856 1345 ntBASIC21.09■□□□□ 0.97
FYCO1Q9BQS8 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
FYCO1Q9BQS8 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FYCO1Q9BQS8 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC21.09■□□□□ 0.97
FYCO1Q9BQS8 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
FYCO1Q9BQS8 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC21.09■□□□□ 0.97
FYCO1Q9BQS8 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FYCO1Q9BQS8 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FYCO1Q9BQS8 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
FYCO1Q9BQS8 AL357373.1-201ENST00000394974 322 ntBASIC21.09■□□□□ 0.97
FYCO1Q9BQS8 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC21.09■□□□□ 0.97
FYCO1Q9BQS8 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC21.09■□□□□ 0.97
FYCO1Q9BQS8 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC21.09■□□□□ 0.97
FYCO1Q9BQS8 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC21.09■□□□□ 0.97
FYCO1Q9BQS8 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC21.09■□□□□ 0.97
FYCO1Q9BQS8 AC092612.1-201ENST00000514501 998 ntBASIC21.09■□□□□ 0.97
FYCO1Q9BQS8 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FYCO1Q9BQS8 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC21.09■□□□□ 0.97
FYCO1Q9BQS8 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms