Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 ISCA2P1-201ENST00000425548 448 ntBASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 HNRNPA1P2-207ENST00000432375 960 ntBASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 LINC01783-202ENST00000614408 828 ntBASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 BX284668.2-205ENST00000619677 828 ntBASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 TBC1D27-202ENST00000424239 1573 ntBASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 AL133338.1-201ENST00000565695 1517 ntBASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 MIR645-201ENST00000385283 94 ntBASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 AKR7A2P1-201ENST00000460134 915 ntBASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 PFN2-206ENST00000461930 606 ntTSL 4 BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 RN7SL258P-201ENST00000478664 300 ntBASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 SCARNA20.5-201ENST00000516991 142 ntBASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 AC132825.4-202ENST00000578792 434 ntBASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 AC083964.2-201ENST00000623988 2396 ntBASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 AC020763.3-201ENST00000625095 2904 ntBASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms