Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 LCE4A-201ENST00000335535 388 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 RPL10-203ENST00000406022 748 ntTSL 3 BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 EIF2B5-202ENST00000432569 984 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 RN7SL638P-201ENST00000494527 290 ntBASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 AC063977.2-201ENST00000601996 421 ntBASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 AC026120.2-201ENST00000617239 309 ntBASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 AC002350.2-201ENST00000623894 1828 ntBASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 AC064850.1-201ENST00000413279 1398 ntBASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 OR52X1P-201ENST00000446117 914 ntBASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 AC113398.1-201ENST00000464124 406 ntBASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 BOLA3P2-201ENST00000586496 323 ntBASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 AC137723.2-201ENST00000623540 398 ntBASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 GARS-210ENST00000627489 324 ntTSL 4 BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 DUX4L33-201ENST00000635217 958 ntBASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 AC106872.9-201ENST00000512437 1393 ntBASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 CCL19-202ENST00000378800 414 ntTSL 2 BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 RN7SL677P-201ENST00000466970 319 ntBASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 AC022532.1-201ENST00000624563 1728 ntBASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC11.61□□□□□ -0.55
CCDC168Q8NDH2 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 PXK-210ENST00000479241 2817 ntTSL 2 BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 MRPL55-210ENST00000366736 660 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms