Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RNF135Q8IUD6 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RNF135Q8IUD6 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RNF135Q8IUD6 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF135Q8IUD6 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC14.96□□□□□ -0.01
RNF135Q8IUD6 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RNF135Q8IUD6 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC14.96□□□□□ -0.01
RNF135Q8IUD6 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC14.96□□□□□ -0.01
RNF135Q8IUD6 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RNF135Q8IUD6 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC14.96□□□□□ -0.01
RNF135Q8IUD6 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RNF135Q8IUD6 USB1-205ENST00000561743 1135 ntTSL 3 BASIC14.96□□□□□ -0.01
RNF135Q8IUD6 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.96□□□□□ -0.01
RNF135Q8IUD6 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.96□□□□□ -0.01
RNF135Q8IUD6 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF135Q8IUD6 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RNF135Q8IUD6 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF135Q8IUD6 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RNF135Q8IUD6 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
RNF135Q8IUD6 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.96□□□□□ -0.02
RNF135Q8IUD6 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.96□□□□□ -0.02
RNF135Q8IUD6 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RNF135Q8IUD6 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RNF135Q8IUD6 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 CTSL-202ENST00000342020 933 ntTSL 2 BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 CELP-201ENST00000411440 1249 ntTSL 5 BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 ST5-261ENST00000626808 1071 ntTSL 5 BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.95□□□□□ -0.02
RNF135Q8IUD6 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNF135Q8IUD6 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 PTGER4P2-201ENST00000328411 252 ntBASIC14.94□□□□□ -0.02
RNF135Q8IUD6 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 MIR645-201ENST00000385283 94 ntBASIC14.94□□□□□ -0.02
RNF135Q8IUD6 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 AF274858.1-201ENST00000406288 372 ntBASIC14.94□□□□□ -0.02
RNF135Q8IUD6 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 AC092580.1-201ENST00000433998 658 ntBASIC14.94□□□□□ -0.02
RNF135Q8IUD6 PTGER4P3-201ENST00000458150 252 ntBASIC14.94□□□□□ -0.02
RNF135Q8IUD6 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 AC023906.1-201ENST00000486386 453 ntBASIC14.94□□□□□ -0.02
RNF135Q8IUD6 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 ADAM3B-201ENST00000569937 840 ntBASIC14.94□□□□□ -0.02
RNF135Q8IUD6 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.94□□□□□ -0.02
RNF135Q8IUD6 SIGLEC22P-201ENST00000599104 714 ntBASIC14.94□□□□□ -0.02
RNF135Q8IUD6 LINC00244-201ENST00000625073 613 ntBASIC14.94□□□□□ -0.02
RNF135Q8IUD6 AC009145.4-201ENST00000625119 1294 ntBASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms