Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 AC027612.1-201ENST00000445234 2395 ntBASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 TCAF1P1-201ENST00000414990 2232 ntBASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.04□□□□□ -0.32
H3F3CQ6NXT2 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 CSNK1G2P1-201ENST00000442675 955 ntBASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 MIR3180-2-201ENST00000581748 88 ntBASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 GMFG-209ENST00000600322 622 ntTSL 5 BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 AC140113.1-201ENST00000603467 169 ntBASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 AC005041.3-201ENST00000606287 649 ntBASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 MIR6727-201ENST00000620702 65 ntBASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
H3F3CQ6NXT2 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
H3F3CQ6NXT2 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
H3F3CQ6NXT2 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
H3F3CQ6NXT2 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
H3F3CQ6NXT2 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
H3F3CQ6NXT2 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
H3F3CQ6NXT2 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
H3F3CQ6NXT2 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.32
H3F3CQ6NXT2 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.02□□□□□ -0.32
H3F3CQ6NXT2 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 CELP-201ENST00000411440 1249 ntTSL 5 BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 DPY19L2P5-201ENST00000456300 331 ntBASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 BUD31-205ENST00000456893 512 ntTSL 5 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms