Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC15.32■□□□□ 0.04
CDKAL1Q5VV42 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDKAL1Q5VV42 DPM3-202ENST00000368399 517 ntBASIC15.32■□□□□ 0.04
CDKAL1Q5VV42 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDKAL1Q5VV42 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.32■□□□□ 0.04
CDKAL1Q5VV42 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDKAL1Q5VV42 BX679664.3-201ENST00000414070 555 ntBASIC15.32■□□□□ 0.04
CDKAL1Q5VV42 GOLGA2P4-201ENST00000441462 777 ntBASIC15.32■□□□□ 0.04
CDKAL1Q5VV42 GAPDHP21-201ENST00000450301 1010 ntBASIC15.32■□□□□ 0.04
CDKAL1Q5VV42 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC15.32■□□□□ 0.04
CDKAL1Q5VV42 ACA64.2-201ENST00000459014 129 ntBASIC15.32■□□□□ 0.04
CDKAL1Q5VV42 AC113935.1-201ENST00000471722 555 ntBASIC15.32■□□□□ 0.04
CDKAL1Q5VV42 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDKAL1Q5VV42 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.32■□□□□ 0.04
CDKAL1Q5VV42 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.32■□□□□ 0.04
CDKAL1Q5VV42 RN7SL163P-201ENST00000583100 276 ntBASIC15.32■□□□□ 0.04
CDKAL1Q5VV42 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.32■□□□□ 0.04
CDKAL1Q5VV42 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKAL1Q5VV42 C2-209ENST00000452323 1999 ntTSL 2 BASIC15.32■□□□□ 0.04
CDKAL1Q5VV42 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.32■□□□□ 0.04
CDKAL1Q5VV42 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CDKAL1Q5VV42 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKAL1Q5VV42 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC15.32■□□□□ 0.04
CDKAL1Q5VV42 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKAL1Q5VV42 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKAL1Q5VV42 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDKAL1Q5VV42 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDKAL1Q5VV42 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC15.32■□□□□ 0.04
CDKAL1Q5VV42 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDKAL1Q5VV42 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKAL1Q5VV42 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKAL1Q5VV42 NRADDP-202ENST00000641269 1585 ntBASIC15.32■□□□□ 0.04
CDKAL1Q5VV42 AC022364.1-202ENST00000617468 2409 ntBASIC15.32■□□□□ 0.04
CDKAL1Q5VV42 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKAL1Q5VV42 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKAL1Q5VV42 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CDKAL1Q5VV42 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 AL035633.1-201ENST00000406139 838 ntBASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 DDC-204ENST00000426377 1700 ntTSL 3 BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKAL1Q5VV42 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 RNA5SP359-201ENST00000364838 113 ntBASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 GDA-203ENST00000376986 1771 ntTSL 2 BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms