Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
RIF1Q5UIP0 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
RIF1Q5UIP0 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RIF1Q5UIP0 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.36□□□□□ -0.27
RIF1Q5UIP0 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 AC136621.1-201ENST00000624017 2304 ntBASIC13.35□□□□□ -0.27
RIF1Q5UIP0 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 RSPH1-202ENST00000398352 937 ntTSL 5 BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 AL512422.2-201ENST00000426453 551 ntTSL 2 BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 AC069277.1-201ENST00000433639 1083 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 C5orf38-203ENST00000457752 387 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 RPS23-205ENST00000510019 1019 ntTSL 4 BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 AC105424.1-201ENST00000514583 209 ntBASIC13.35□□□□□ -0.27
RIF1Q5UIP0 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 DNM1P50-201ENST00000565767 508 ntBASIC13.35□□□□□ -0.27
RIF1Q5UIP0 AC136475.9-201ENST00000605240 497 ntBASIC13.35□□□□□ -0.27
RIF1Q5UIP0 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 LINC01615-203ENST00000634877 673 ntTSL 5 BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.35□□□□□ -0.27
RIF1Q5UIP0 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 SNU13-204ENST00000402458 462 ntTSL 3 BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 AL512444.1-201ENST00000419644 480 ntTSL 2 BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 CNN2P1-201ENST00000453616 918 ntBASIC13.35□□□□□ -0.27
RIF1Q5UIP0 SNORA47-201ENST00000458862 138 ntBASIC13.35□□□□□ -0.27
RIF1Q5UIP0 OR2A15P-201ENST00000463814 900 ntBASIC13.35□□□□□ -0.27
RIF1Q5UIP0 VAMP2-203ENST00000481878 557 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 DIS3L2P1-201ENST00000509197 559 ntBASIC13.35□□□□□ -0.27
RIF1Q5UIP0 FAM153C-208ENST00000511189 926 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 AC025682.1-203ENST00000584391 442 ntTSL 2 BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RIF1Q5UIP0 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 RBP1-201ENST00000232219 898 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 LINC00685-201ENST00000391707 428 ntTSL 5 BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 SNAP25-AS1-202ENST00000426491 804 ntTSL 5 BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 TPI1P2-201ENST00000491343 752 ntBASIC13.34□□□□□ -0.27
RIF1Q5UIP0 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 BMF-209ENST00000561282 747 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 MIR22HG-206ENST00000573127 899 ntTSL 3 BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 SOX2-OT-228ENST00000597828 864 ntTSL 5 BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 RBP1-206ENST00000617459 667 ntTSL 2 BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 AC073592.10-201ENST00000624789 597 ntBASIC13.34□□□□□ -0.27
RIF1Q5UIP0 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 KLF6-206ENST00000497571 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RIF1Q5UIP0 LINC02486-201ENST00000604157 3000 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms