Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC025183.3-201ENST00000623526 1482 ntBASIC15.84■□□□□ 0.13
TPM4P67936 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TPM4P67936 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC15.84■□□□□ 0.13
TPM4P67936 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TPM4P67936 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TPM4P67936 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC15.84■□□□□ 0.13
TPM4P67936 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TPM4P67936 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TPM4P67936 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
TPM4P67936 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TPM4P67936 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC15.84■□□□□ 0.13
TPM4P67936 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC15.84■□□□□ 0.13
TPM4P67936 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TPM4P67936 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TPM4P67936 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TPM4P67936 CCT8L1P-201ENST00000465400 1674 ntBASIC15.84■□□□□ 0.13
TPM4P67936 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TPM4P67936 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TPM4P67936 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TPM4P67936 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TPM4P67936 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TPM4P67936 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TPM4P67936 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.84■□□□□ 0.13
TPM4P67936 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.84■□□□□ 0.13
TPM4P67936 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.84■□□□□ 0.13
TPM4P67936 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.84■□□□□ 0.13
TPM4P67936 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.84■□□□□ 0.13
TPM4P67936 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.84■□□□□ 0.13
TPM4P67936 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.84■□□□□ 0.13
TPM4P67936 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
TPM4P67936 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.84■□□□□ 0.13
TPM4P67936 AC025279.2-201ENST00000569730 653 ntBASIC15.84■□□□□ 0.13
TPM4P67936 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.84■□□□□ 0.13
TPM4P67936 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.84■□□□□ 0.13
TPM4P67936 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
TPM4P67936 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TPM4P67936 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TPM4P67936 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TPM4P67936 AC108024.1-201ENST00000626286 1721 ntBASIC15.84■□□□□ 0.13
TPM4P67936 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TPM4P67936 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TPM4P67936 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TPM4P67936 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC15.84■□□□□ 0.13
TPM4P67936 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TPM4P67936 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TPM4P67936 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TPM4P67936 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TPM4P67936 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC15.84■□□□□ 0.13
TPM4P67936 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC15.84■□□□□ 0.13
TPM4P67936 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
TPM4P67936 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TPM4P67936 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.84■□□□□ 0.13
TPM4P67936 FAM95B1-212ENST00000592873 4692 ntBASIC15.83■□□□□ 0.13
TPM4P67936 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC15.83■□□□□ 0.13
TPM4P67936 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TPM4P67936 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC15.83■□□□□ 0.13
TPM4P67936 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
TPM4P67936 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC15.83■□□□□ 0.13
TPM4P67936 EML1-203ENST00000334192 4064 ntTSL 5 BASIC15.83■□□□□ 0.12
TPM4P67936 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TPM4P67936 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC15.83■□□□□ 0.12
TPM4P67936 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TPM4P67936 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TPM4P67936 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
TPM4P67936 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
TPM4P67936 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TPM4P67936 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TPM4P67936 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TPM4P67936 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TPM4P67936 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.83■□□□□ 0.12
TPM4P67936 AC112492.5-201ENST00000421897 457 ntBASIC15.83■□□□□ 0.12
TPM4P67936 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.83■□□□□ 0.12
TPM4P67936 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.83■□□□□ 0.12
TPM4P67936 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TPM4P67936 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
TPM4P67936 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TPM4P67936 RN7SL713P-201ENST00000582127 302 ntBASIC15.83■□□□□ 0.12
TPM4P67936 AL136301.1-201ENST00000615830 422 ntBASIC15.83■□□□□ 0.12
TPM4P67936 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.83■□□□□ 0.12
TPM4P67936 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TPM4P67936 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.83■□□□□ 0.12
TPM4P67936 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TPM4P67936 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC15.83■□□□□ 0.12
TPM4P67936 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
TPM4P67936 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TPM4P67936 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TPM4P67936 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TPM4P67936 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TPM4P67936 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TPM4P67936 AL354989.2-201ENST00000435838 1540 ntBASIC15.83■□□□□ 0.12
TPM4P67936 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
TPM4P67936 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TPM4P67936 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC15.83■□□□□ 0.12
TPM4P67936 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TPM4P67936 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC15.83■□□□□ 0.12
TPM4P67936 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TPM4P67936 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TPM4P67936 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC15.82■□□□□ 0.12
TPM4P67936 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TPM4P67936 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms