Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NCKAP1LP55160 KRT8P2-201ENST00000556193 944 ntBASIC15.31■□□□□ 0.04
NCKAP1LP55160 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC15.31■□□□□ 0.04
NCKAP1LP55160 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC15.31■□□□□ 0.04
NCKAP1LP55160 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC15.31■□□□□ 0.04
NCKAP1LP55160 MIR4326-201ENST00000582203 59 ntBASIC15.31■□□□□ 0.04
NCKAP1LP55160 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC15.31■□□□□ 0.04
NCKAP1LP55160 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC15.31■□□□□ 0.04
NCKAP1LP55160 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.31■□□□□ 0.04
NCKAP1LP55160 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC15.31■□□□□ 0.04
NCKAP1LP55160 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
NCKAP1LP55160 AC242376.2-201ENST00000619355 883 ntBASIC15.31■□□□□ 0.04
NCKAP1LP55160 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NCKAP1LP55160 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.31■□□□□ 0.04
NCKAP1LP55160 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
NCKAP1LP55160 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC15.31■□□□□ 0.04
NCKAP1LP55160 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NCKAP1LP55160 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NCKAP1LP55160 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCKAP1LP55160 Z98885.3-201ENST00000624882 1757 ntBASIC15.31■□□□□ 0.04
NCKAP1LP55160 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NCKAP1LP55160 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NCKAP1LP55160 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NCKAP1LP55160 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCKAP1LP55160 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCKAP1LP55160 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.31■□□□□ 0.04
NCKAP1LP55160 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NCKAP1LP55160 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NCKAP1LP55160 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NCKAP1LP55160 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCKAP1LP55160 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1LP55160 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1LP55160 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
NCKAP1LP55160 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1LP55160 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.3■□□□□ 0.04
NCKAP1LP55160 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NCKAP1LP55160 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1LP55160 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1LP55160 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1LP55160 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1LP55160 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1LP55160 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1LP55160 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1LP55160 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1LP55160 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1LP55160 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1LP55160 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1LP55160 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1LP55160 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1LP55160 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1LP55160 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1LP55160 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1LP55160 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1LP55160 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1LP55160 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1LP55160 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1LP55160 AL391647.1-201ENST00000395664 511 ntBASIC15.3■□□□□ 0.04
NCKAP1LP55160 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1LP55160 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1LP55160 CELP-201ENST00000411440 1249 ntTSL 5 BASIC15.3■□□□□ 0.04
NCKAP1LP55160 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC15.3■□□□□ 0.04
NCKAP1LP55160 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC15.3■□□□□ 0.04
NCKAP1LP55160 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1LP55160 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NCKAP1LP55160 RN7SL767P-201ENST00000493013 295 ntBASIC15.3■□□□□ 0.04
NCKAP1LP55160 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC15.3■□□□□ 0.04
NCKAP1LP55160 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
NCKAP1LP55160 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1LP55160 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.3■□□□□ 0.04
NCKAP1LP55160 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC15.3■□□□□ 0.04
NCKAP1LP55160 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC15.3■□□□□ 0.04
NCKAP1LP55160 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
NCKAP1LP55160 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.3■□□□□ 0.04
NCKAP1LP55160 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC15.3■□□□□ 0.04
NCKAP1LP55160 MIR3940-201ENST00000579148 102 ntBASIC15.3■□□□□ 0.04
NCKAP1LP55160 AL356740.1-201ENST00000602192 1297 ntBASIC15.3■□□□□ 0.04
NCKAP1LP55160 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC15.3■□□□□ 0.04
NCKAP1LP55160 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC15.3■□□□□ 0.04
NCKAP1LP55160 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1LP55160 YRDCP1-201ENST00000621419 643 ntBASIC15.3■□□□□ 0.04
NCKAP1LP55160 AL353726.2-201ENST00000623259 884 ntBASIC15.3■□□□□ 0.04
NCKAP1LP55160 AC025262.2-201ENST00000623975 1056 ntBASIC15.3■□□□□ 0.04
NCKAP1LP55160 AC097376.2-205ENST00000610159 5334 ntBASIC15.3■□□□□ 0.04
NCKAP1LP55160 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
NCKAP1LP55160 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1LP55160 AC079781.5-202ENST00000641784 3743 ntBASIC15.3■□□□□ 0.04
NCKAP1LP55160 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1LP55160 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1LP55160 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1LP55160 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1LP55160 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC15.3■□□□□ 0.04
NCKAP1LP55160 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1LP55160 CR383656.2-201ENST00000548656 2254 ntBASIC15.29■□□□□ 0.04
NCKAP1LP55160 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
NCKAP1LP55160 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1LP55160 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1LP55160 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC15.29■□□□□ 0.04
NCKAP1LP55160 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1LP55160 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1LP55160 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms