Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC1A1P43005 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.72□□□□□ -0.05
SLC1A1P43005 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
SLC1A1P43005 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.72□□□□□ -0.05
SLC1A1P43005 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC1A1P43005 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SLC1A1P43005 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SLC1A1P43005 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC14.72□□□□□ -0.05
SLC1A1P43005 DLX4-206ENST00000611342 1662 ntBASIC14.72□□□□□ -0.05
SLC1A1P43005 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC1A1P43005 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC1A1P43005 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC14.72□□□□□ -0.05
SLC1A1P43005 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC1A1P43005 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
SLC1A1P43005 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC1A1P43005 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC14.72□□□□□ -0.05
SLC1A1P43005 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.72□□□□□ -0.05
SLC1A1P43005 BX679664.3-201ENST00000414070 555 ntBASIC14.72□□□□□ -0.05
SLC1A1P43005 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SLC1A1P43005 RPL13AP20-201ENST00000459725 609 ntBASIC14.72□□□□□ -0.05
SLC1A1P43005 AC113935.1-201ENST00000471722 555 ntBASIC14.72□□□□□ -0.05
SLC1A1P43005 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC1A1P43005 FAM8A2P-201ENST00000528813 1142 ntBASIC14.72□□□□□ -0.05
SLC1A1P43005 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.72□□□□□ -0.05
SLC1A1P43005 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC14.72□□□□□ -0.05
SLC1A1P43005 AL356740.1-201ENST00000602192 1297 ntBASIC14.72□□□□□ -0.05
SLC1A1P43005 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SLC1A1P43005 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
SLC1A1P43005 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.72□□□□□ -0.05
SLC1A1P43005 AL035252.4-201ENST00000624174 288 ntBASIC14.72□□□□□ -0.05
SLC1A1P43005 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC1A1P43005 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC1A1P43005 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SLC1A1P43005 LINC00638-201ENST00000555578 2518 ntBASIC14.72□□□□□ -0.05
SLC1A1P43005 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC14.72□□□□□ -0.05
SLC1A1P43005 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC1A1P43005 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC1A1P43005 AP002761.4-201ENST00000565433 3361 ntBASIC14.72□□□□□ -0.05
SLC1A1P43005 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC14.72□□□□□ -0.05
SLC1A1P43005 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC1A1P43005 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC14.72□□□□□ -0.05
SLC1A1P43005 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC1A1P43005 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
SLC1A1P43005 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SLC1A1P43005 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC14.72□□□□□ -0.05
SLC1A1P43005 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.72□□□□□ -0.05
SLC1A1P43005 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SLC1A1P43005 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC14.72□□□□□ -0.05
SLC1A1P43005 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC14.72□□□□□ -0.05
SLC1A1P43005 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.72□□□□□ -0.05
SLC1A1P43005 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC1A1P43005 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
SLC1A1P43005 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A1P43005 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A1P43005 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A1P43005 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
SLC1A1P43005 AC026271.4-201ENST00000578214 1833 ntBASIC14.71□□□□□ -0.05
SLC1A1P43005 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A1P43005 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC14.71□□□□□ -0.05
SLC1A1P43005 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A1P43005 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A1P43005 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
SLC1A1P43005 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A1P43005 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.71□□□□□ -0.05
SLC1A1P43005 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A1P43005 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A1P43005 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.71□□□□□ -0.05
SLC1A1P43005 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A1P43005 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A1P43005 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.71□□□□□ -0.05
SLC1A1P43005 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A1P43005 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A1P43005 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC14.71□□□□□ -0.05
SLC1A1P43005 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A1P43005 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.71□□□□□ -0.05
SLC1A1P43005 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
SLC1A1P43005 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A1P43005 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.71□□□□□ -0.05
SLC1A1P43005 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.71□□□□□ -0.05
SLC1A1P43005 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A1P43005 AC006987.1-201ENST00000413610 527 ntBASIC14.71□□□□□ -0.05
SLC1A1P43005 MARK2P5-201ENST00000507649 634 ntBASIC14.71□□□□□ -0.05
SLC1A1P43005 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.71□□□□□ -0.05
SLC1A1P43005 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.71□□□□□ -0.05
SLC1A1P43005 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.71□□□□□ -0.05
SLC1A1P43005 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.71□□□□□ -0.05
SLC1A1P43005 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.71□□□□□ -0.05
SLC1A1P43005 AC104982.3-201ENST00000581995 514 ntBASIC14.71□□□□□ -0.05
SLC1A1P43005 MIR4259-201ENST00000584466 101 ntBASIC14.71□□□□□ -0.05
SLC1A1P43005 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.71□□□□□ -0.05
SLC1A1P43005 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.71□□□□□ -0.05
SLC1A1P43005 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.71□□□□□ -0.05
SLC1A1P43005 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.71□□□□□ -0.05
SLC1A1P43005 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.71□□□□□ -0.05
SLC1A1P43005 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A1P43005 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A1P43005 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.71□□□□□ -0.05
SLC1A1P43005 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A1P43005 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC14.71□□□□□ -0.06
SLC1A1P43005 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms