Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
CKS2P33552 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC10.39□□□□□ -0.75
CKS2P33552 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC10.39□□□□□ -0.75
CKS2P33552 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CKS2P33552 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
CKS2P33552 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CKS2P33552 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC10.39□□□□□ -0.75
CKS2P33552 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
CKS2P33552 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CKS2P33552 DDAH1-201ENST00000284031 3920 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CKS2P33552 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
CKS2P33552 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
CKS2P33552 TENM3-204ENST00000511685 10896 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
CKS2P33552 AC110048.1-201ENST00000604293 2157 ntBASIC10.39□□□□□ -0.75
CKS2P33552 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
CKS2P33552 OR2B11-202ENST00000641149 6414 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
CKS2P33552 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CKS2P33552 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CKS2P33552 ST6GAL2-201ENST00000361686 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CKS2P33552 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC10.39□□□□□ -0.75
CKS2P33552 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
CKS2P33552 KRT8P28-201ENST00000433288 1390 ntBASIC10.39□□□□□ -0.75
CKS2P33552 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
CKS2P33552 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC10.39□□□□□ -0.75
CKS2P33552 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CKS2P33552 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC10.39□□□□□ -0.75
CKS2P33552 ARMC9-215ENST00000614261 4975 ntTSL 5 BASIC10.38□□□□□ -0.75
CKS2P33552 PARP15-205ENST00000483793 4439 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CKS2P33552 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
CKS2P33552 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC10.38□□□□□ -0.75
CKS2P33552 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CKS2P33552 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CKS2P33552 SLC26A2-201ENST00000286298 8080 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CKS2P33552 MAP7-208ENST00000617204 4536 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
CKS2P33552 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CKS2P33552 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CKS2P33552 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC10.38□□□□□ -0.75
CKS2P33552 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
CKS2P33552 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CKS2P33552 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
CKS2P33552 CCDC88A-207ENST00000436346 9811 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
CKS2P33552 AC012531.1-201ENST00000562848 2680 ntBASIC10.38□□□□□ -0.75
CKS2P33552 SLC7A1-201ENST00000380752 7347 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CKS2P33552 FN1-206ENST00000359671 8524 ntTSL 5 BASIC10.38□□□□□ -0.75
CKS2P33552 AP001972.5-201ENST00000624624 2338 ntBASIC10.38□□□□□ -0.75
CKS2P33552 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
CKS2P33552 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CKS2P33552 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
CKS2P33552 LVRN-202ENST00000395528 4544 ntTSL 5 BASIC10.38□□□□□ -0.75
CKS2P33552 VAT1L-201ENST00000302536 3825 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CKS2P33552 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CKS2P33552 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC10.38□□□□□ -0.75
CKS2P33552 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CKS2P33552 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC10.38□□□□□ -0.75
CKS2P33552 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC10.38□□□□□ -0.75
CKS2P33552 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC10.38□□□□□ -0.75
CKS2P33552 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC10.38□□□□□ -0.75
CKS2P33552 GNAQP1-201ENST00000444815 1067 ntBASIC10.38□□□□□ -0.75
CKS2P33552 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC10.38□□□□□ -0.75
CKS2P33552 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC10.38□□□□□ -0.75
CKS2P33552 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC10.38□□□□□ -0.75
CKS2P33552 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC10.38□□□□□ -0.75
CKS2P33552 AC120045.2-201ENST00000567334 178 ntBASIC10.38□□□□□ -0.75
CKS2P33552 IFT20-206ENST00000578122 834 ntTSL 2 BASIC10.38□□□□□ -0.75
CKS2P33552 IFT20-208ENST00000578985 831 ntTSL 3 BASIC10.38□□□□□ -0.75
CKS2P33552 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC10.38□□□□□ -0.75
CKS2P33552 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC10.38□□□□□ -0.75
CKS2P33552 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC10.38□□□□□ -0.75
CKS2P33552 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC10.38□□□□□ -0.75
CKS2P33552 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC10.38□□□□□ -0.75
CKS2P33552 ATAD5-201ENST00000321990 6869 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CKS2P33552 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC10.38□□□□□ -0.75
CKS2P33552 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CKS2P33552 AREL1-201ENST00000356357 5456 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CKS2P33552 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
CKS2P33552 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
CKS2P33552 COL8A1-201ENST00000261037 5705 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CKS2P33552 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CKS2P33552 TNRC6C-201ENST00000301624 9632 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
CKS2P33552 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC10.38□□□□□ -0.75
CKS2P33552 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC10.38□□□□□ -0.75
CKS2P33552 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC10.38□□□□□ -0.75
CKS2P33552 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CKS2P33552 INTS4P2-202ENST00000614726 2019 ntBASIC10.38□□□□□ -0.75
CKS2P33552 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CKS2P33552 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC10.38□□□□□ -0.75
CKS2P33552 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC10.38□□□□□ -0.75
CKS2P33552 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
CKS2P33552 MYO18B-201ENST00000335473 8565 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
CKS2P33552 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CKS2P33552 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
CKS2P33552 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
CKS2P33552 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CKS2P33552 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
CKS2P33552 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
CKS2P33552 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC10.37□□□□□ -0.75
CKS2P33552 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC10.37□□□□□ -0.75
CKS2P33552 BTBD7P1-201ENST00000447253 1453 ntBASIC10.37□□□□□ -0.75
CKS2P33552 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC10.37□□□□□ -0.75
CKS2P33552 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms