Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.23□□□□□ -0.29
CHMP24386 RPL18P13-201ENST00000478088 569 ntBASIC13.23□□□□□ -0.29
CHMP24386 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.23□□□□□ -0.29
CHMP24386 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.23□□□□□ -0.29
CHMP24386 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.23□□□□□ -0.29
CHMP24386 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHMP24386 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.23□□□□□ -0.29
CHMP24386 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.23□□□□□ -0.29
CHMP24386 RBM8B-201ENST00000555532 525 ntBASIC13.23□□□□□ -0.29
CHMP24386 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.23□□□□□ -0.29
CHMP24386 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHMP24386 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC13.23□□□□□ -0.29
CHMP24386 AC090164.2-201ENST00000611487 516 ntBASIC13.23□□□□□ -0.29
CHMP24386 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.23□□□□□ -0.29
CHMP24386 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.23□□□□□ -0.29
CHMP24386 AL139099.5-201ENST00000635274 300 ntBASIC13.23□□□□□ -0.29
CHMP24386 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHMP24386 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CHMP24386 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHMP24386 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHMP24386 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
CHMP24386 AL445209.1-201ENST00000607269 3491 ntBASIC13.23□□□□□ -0.29
CHMP24386 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CHMP24386 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHMP24386 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CHMP24386 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHMP24386 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHMP24386 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CHMP24386 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CHMP24386 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CHMP24386 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHMP24386 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.22□□□□□ -0.29
CHMP24386 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHMP24386 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC13.22□□□□□ -0.29
CHMP24386 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CHMP24386 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHMP24386 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHMP24386 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHMP24386 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.22□□□□□ -0.29
CHMP24386 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHMP24386 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CHMP24386 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.22□□□□□ -0.29
CHMP24386 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHMP24386 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC13.22□□□□□ -0.29
CHMP24386 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CHMP24386 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHMP24386 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHMP24386 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHMP24386 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHMP24386 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CHMP24386 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHMP24386 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHMP24386 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHMP24386 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHMP24386 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHMP24386 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.22□□□□□ -0.29
CHMP24386 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHMP24386 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.22□□□□□ -0.29
CHMP24386 HLA-J-204ENST00000495278 958 ntBASIC13.22□□□□□ -0.29
CHMP24386 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.22□□□□□ -0.29
CHMP24386 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.22□□□□□ -0.29
CHMP24386 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.22□□□□□ -0.29
CHMP24386 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHMP24386 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHMP24386 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.22□□□□□ -0.29
CHMP24386 AL160314.3-201ENST00000556041 767 ntBASIC13.22□□□□□ -0.29
CHMP24386 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.22□□□□□ -0.29
CHMP24386 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHMP24386 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHMP24386 AC005962.1-201ENST00000584100 773 ntBASIC13.22□□□□□ -0.29
CHMP24386 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.22□□□□□ -0.29
CHMP24386 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.22□□□□□ -0.29
CHMP24386 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.22□□□□□ -0.29
CHMP24386 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHMP24386 AC100757.4-201ENST00000626934 759 ntBASIC13.22□□□□□ -0.29
CHMP24386 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHMP24386 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
CHMP24386 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHMP24386 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHMP24386 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHMP24386 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHMP24386 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHMP24386 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHMP24386 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHMP24386 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHMP24386 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.22□□□□□ -0.29
CHMP24386 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHMP24386 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHMP24386 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CHMP24386 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHMP24386 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHMP24386 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.22□□□□□ -0.29
CHMP24386 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CHMP24386 PEG13-201ENST00000631594 5667 ntBASIC13.22□□□□□ -0.29
CHMP24386 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHMP24386 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CHMP24386 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CHMP24386 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CHMP24386 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.21□□□□□ -0.29
CHMP24386 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms