Protein–RNA interactions for Protein: P23229

ITGA6, Integrin alpha-6, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6P23229 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA6P23229 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA6P23229 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA6P23229 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA6P23229 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC17.12■□□□□ 0.33
ITGA6P23229 KRT17P4-201ENST00000429445 819 ntBASIC17.12■□□□□ 0.33
ITGA6P23229 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC17.12■□□□□ 0.33
ITGA6P23229 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC17.12■□□□□ 0.33
ITGA6P23229 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC17.12■□□□□ 0.33
ITGA6P23229 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ITGA6P23229 AC010632.2-201ENST00000588369 1224 ntBASIC17.12■□□□□ 0.33
ITGA6P23229 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC17.12■□□□□ 0.33
ITGA6P23229 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
ITGA6P23229 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC17.12■□□□□ 0.33
ITGA6P23229 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA6P23229 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA6P23229 AC111170.3-201ENST00000624282 2464 ntBASIC17.12■□□□□ 0.33
ITGA6P23229 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC17.12■□□□□ 0.33
ITGA6P23229 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC17.12■□□□□ 0.33
ITGA6P23229 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA6P23229 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA6P23229 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC17.12■□□□□ 0.33
ITGA6P23229 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA6P23229 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA6P23229 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA6P23229 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA6P23229 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA6P23229 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA6P23229 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA6P23229 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA6P23229 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA6P23229 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA6P23229 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC17.11■□□□□ 0.33
ITGA6P23229 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA6P23229 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ITGA6P23229 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA6P23229 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA6P23229 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ITGA6P23229 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA6P23229 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA6P23229 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA6P23229 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA6P23229 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA6P23229 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC17.11■□□□□ 0.33
ITGA6P23229 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA6P23229 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC17.11■□□□□ 0.33
ITGA6P23229 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
ITGA6P23229 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC17.11■□□□□ 0.33
ITGA6P23229 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC17.11■□□□□ 0.33
ITGA6P23229 ASS1P2-201ENST00000439895 1223 ntBASIC17.11■□□□□ 0.33
ITGA6P23229 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA6P23229 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
ITGA6P23229 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC17.11■□□□□ 0.33
ITGA6P23229 ALG1L3P-201ENST00000503331 765 ntBASIC17.11■□□□□ 0.33
ITGA6P23229 THY1-209ENST00000580275 578 ntTSL 3 BASIC17.11■□□□□ 0.33
ITGA6P23229 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ITGA6P23229 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC17.11■□□□□ 0.33
ITGA6P23229 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
ITGA6P23229 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC17.11■□□□□ 0.33
ITGA6P23229 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC17.11■□□□□ 0.33
ITGA6P23229 CR392039.2-201ENST00000623182 509 ntBASIC17.11■□□□□ 0.33
ITGA6P23229 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA6P23229 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ITGA6P23229 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC17.11■□□□□ 0.33
ITGA6P23229 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA6P23229 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA6P23229 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA6P23229 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA6P23229 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA6P23229 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA6P23229 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA6P23229 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA6P23229 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA6P23229 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITGA6P23229 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ITGA6P23229 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITGA6P23229 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
ITGA6P23229 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ITGA6P23229 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITGA6P23229 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITGA6P23229 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ITGA6P23229 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITGA6P23229 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC17.1■□□□□ 0.33
ITGA6P23229 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITGA6P23229 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
ITGA6P23229 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
ITGA6P23229 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC17.1■□□□□ 0.33
ITGA6P23229 KRT18P4-201ENST00000422599 1288 ntBASIC17.1■□□□□ 0.33
ITGA6P23229 AP000244.1-201ENST00000424582 201 ntBASIC17.1■□□□□ 0.33
ITGA6P23229 HCG27-204ENST00000424675 895 ntTSL 3 BASIC17.1■□□□□ 0.33
ITGA6P23229 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC17.1■□□□□ 0.33
ITGA6P23229 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC17.1■□□□□ 0.33
ITGA6P23229 NSD1-211ENST00000511258 809 ntTSL 3 BASIC17.1■□□□□ 0.33
ITGA6P23229 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC17.1■□□□□ 0.33
ITGA6P23229 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC17.1■□□□□ 0.33
ITGA6P23229 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC17.1■□□□□ 0.33
ITGA6P23229 AL359219.1-201ENST00000556311 934 ntBASIC17.1■□□□□ 0.33
ITGA6P23229 AL022344.2-201ENST00000568976 968 ntBASIC17.1■□□□□ 0.33
ITGA6P23229 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC17.1■□□□□ 0.33
ITGA6P23229 AC005777.1-201ENST00000588332 187 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms