Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
THBS1P07996 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13□□□□□ -0.33
THBS1P07996 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.99□□□□□ -0.33
THBS1P07996 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.99□□□□□ -0.33
THBS1P07996 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
THBS1P07996 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
THBS1P07996 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
THBS1P07996 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
THBS1P07996 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.99□□□□□ -0.33
THBS1P07996 AL355102.3-201ENST00000554299 1678 ntBASIC12.99□□□□□ -0.33
THBS1P07996 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
THBS1P07996 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
THBS1P07996 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
THBS1P07996 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
THBS1P07996 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
THBS1P07996 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
THBS1P07996 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
THBS1P07996 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
THBS1P07996 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
THBS1P07996 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
THBS1P07996 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
THBS1P07996 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
THBS1P07996 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
THBS1P07996 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
THBS1P07996 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
THBS1P07996 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
THBS1P07996 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
THBS1P07996 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
THBS1P07996 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC12.99□□□□□ -0.33
THBS1P07996 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.99□□□□□ -0.33
THBS1P07996 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
THBS1P07996 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC12.99□□□□□ -0.33
THBS1P07996 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
THBS1P07996 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
THBS1P07996 RN7SL530P-201ENST00000485097 298 ntBASIC12.99□□□□□ -0.33
THBS1P07996 RHEB-207ENST00000496004 744 ntTSL 2 BASIC12.99□□□□□ -0.33
THBS1P07996 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC12.99□□□□□ -0.33
THBS1P07996 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC12.99□□□□□ -0.33
THBS1P07996 AP001258.2-201ENST00000529891 490 ntBASIC12.99□□□□□ -0.33
THBS1P07996 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
THBS1P07996 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC12.99□□□□□ -0.33
THBS1P07996 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
THBS1P07996 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC12.99□□□□□ -0.33
THBS1P07996 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
THBS1P07996 AC015967.2-201ENST00000624092 234 ntBASIC12.99□□□□□ -0.33
THBS1P07996 AC006435.4-201ENST00000625037 234 ntBASIC12.99□□□□□ -0.33
THBS1P07996 AL356737.1-201ENST00000634391 234 ntBASIC12.99□□□□□ -0.33
THBS1P07996 AL139424.3-202ENST00000641619 917 ntBASIC12.99□□□□□ -0.33
THBS1P07996 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
THBS1P07996 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.99□□□□□ -0.33
THBS1P07996 AC131212.3-201ENST00000624087 4219 ntBASIC12.99□□□□□ -0.33
THBS1P07996 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
THBS1P07996 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
THBS1P07996 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12.99□□□□□ -0.33
THBS1P07996 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
THBS1P07996 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
THBS1P07996 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
THBS1P07996 MARK2P16-201ENST00000605714 1723 ntBASIC12.99□□□□□ -0.33
THBS1P07996 AC108024.1-201ENST00000626286 1721 ntBASIC12.99□□□□□ -0.33
THBS1P07996 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
THBS1P07996 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
THBS1P07996 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
THBS1P07996 AC093462.1-201ENST00000621167 1683 ntBASIC12.99□□□□□ -0.33
THBS1P07996 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
THBS1P07996 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
THBS1P07996 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
THBS1P07996 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
THBS1P07996 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
THBS1P07996 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
THBS1P07996 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
THBS1P07996 AC114271.1-201ENST00000612689 2813 ntBASIC12.98□□□□□ -0.33
THBS1P07996 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
THBS1P07996 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
THBS1P07996 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
THBS1P07996 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
THBS1P07996 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
THBS1P07996 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
THBS1P07996 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
THBS1P07996 MKRN5P-201ENST00000445263 1467 ntBASIC12.98□□□□□ -0.33
THBS1P07996 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
THBS1P07996 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
THBS1P07996 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
THBS1P07996 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.98□□□□□ -0.33
THBS1P07996 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
THBS1P07996 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
THBS1P07996 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
THBS1P07996 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
THBS1P07996 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
THBS1P07996 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
THBS1P07996 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
THBS1P07996 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
THBS1P07996 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
THBS1P07996 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC12.98□□□□□ -0.33
THBS1P07996 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
THBS1P07996 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
THBS1P07996 BAX-205ENST00000391871 687 ntTSL 5 BASIC12.98□□□□□ -0.33
THBS1P07996 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
THBS1P07996 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.98□□□□□ -0.33
THBS1P07996 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC12.98□□□□□ -0.33
THBS1P07996 PSAT1P2-201ENST00000426107 972 ntBASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms