Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC14.69□□□□□ -0.06
RB1P06400 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC14.69□□□□□ -0.06
RB1P06400 BX322534.1-201ENST00000635574 241 ntBASIC14.69□□□□□ -0.06
RB1P06400 AC215524.1-201ENST00000635696 241 ntBASIC14.69□□□□□ -0.06
RB1P06400 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RB1P06400 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
RB1P06400 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
RB1P06400 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RB1P06400 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RB1P06400 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RB1P06400 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RB1P06400 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RB1P06400 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RB1P06400 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RB1P06400 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RB1P06400 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RB1P06400 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.69□□□□□ -0.06
RB1P06400 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RB1P06400 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RB1P06400 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RB1P06400 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.69□□□□□ -0.06
RB1P06400 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RB1P06400 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RB1P06400 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RB1P06400 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.68□□□□□ -0.06
RB1P06400 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
RB1P06400 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RB1P06400 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.68□□□□□ -0.06
RB1P06400 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RB1P06400 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RB1P06400 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.68□□□□□ -0.06
RB1P06400 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.68□□□□□ -0.06
RB1P06400 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RB1P06400 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RB1P06400 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
RB1P06400 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RB1P06400 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
RB1P06400 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RB1P06400 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RB1P06400 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RB1P06400 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC14.68□□□□□ -0.06
RB1P06400 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RB1P06400 AC008494.1-201ENST00000497612 796 ntBASIC14.68□□□□□ -0.06
RB1P06400 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RB1P06400 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC14.68□□□□□ -0.06
RB1P06400 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RB1P06400 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC14.68□□□□□ -0.06
RB1P06400 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC14.68□□□□□ -0.06
RB1P06400 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC14.68□□□□□ -0.06
RB1P06400 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC14.68□□□□□ -0.06
RB1P06400 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RB1P06400 AC080013.5-201ENST00000607044 679 ntBASIC14.68□□□□□ -0.06
RB1P06400 AC020922.4-201ENST00000621389 339 ntBASIC14.68□□□□□ -0.06
RB1P06400 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.68□□□□□ -0.06
RB1P06400 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RB1P06400 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RB1P06400 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RB1P06400 AC064850.1-201ENST00000413279 1398 ntBASIC14.68□□□□□ -0.06
RB1P06400 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RB1P06400 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
RB1P06400 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.68□□□□□ -0.06
RB1P06400 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.68□□□□□ -0.06
RB1P06400 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RB1P06400 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RB1P06400 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RB1P06400 OR2I1P-209ENST00000641730 5365 ntBASIC14.68□□□□□ -0.06
RB1P06400 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
RB1P06400 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RB1P06400 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
RB1P06400 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RB1P06400 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.68□□□□□ -0.06
RB1P06400 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RB1P06400 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.68□□□□□ -0.06
RB1P06400 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RB1P06400 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RB1P06400 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.67□□□□□ -0.06
RB1P06400 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RB1P06400 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.67□□□□□ -0.06
RB1P06400 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
RB1P06400 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC14.67□□□□□ -0.06
RB1P06400 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RB1P06400 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RB1P06400 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC14.67□□□□□ -0.06
RB1P06400 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RB1P06400 AC007279.1-201ENST00000448547 837 ntBASIC14.67□□□□□ -0.06
RB1P06400 ALG1L15P-201ENST00000482834 794 ntBASIC14.67□□□□□ -0.06
RB1P06400 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RB1P06400 ACY3-202ENST00000529256 933 ntTSL 3 BASIC14.67□□□□□ -0.06
RB1P06400 AC023051.2-201ENST00000541141 460 ntBASIC14.67□□□□□ -0.06
RB1P06400 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC14.67□□□□□ -0.06
RB1P06400 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC14.67□□□□□ -0.06
RB1P06400 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC14.67□□□□□ -0.06
RB1P06400 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC14.67□□□□□ -0.06
RB1P06400 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RB1P06400 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC14.67□□□□□ -0.06
RB1P06400 AC137723.2-201ENST00000623540 398 ntBASIC14.67□□□□□ -0.06
RB1P06400 AC245369.7-201ENST00000631386 350 ntBASIC14.67□□□□□ -0.06
RB1P06400 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RB1P06400 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC14.67□□□□□ -0.06
RB1P06400 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms