Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.1■□□□□ 0.01
TUBB4AP04350 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.1■□□□□ 0.01
TUBB4AP04350 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
TUBB4AP04350 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC15.1■□□□□ 0.01
TUBB4AP04350 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.1■□□□□ 0.01
TUBB4AP04350 ENPP7P5-201ENST00000541031 1031 ntBASIC15.1■□□□□ 0.01
TUBB4AP04350 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.1■□□□□ 0.01
TUBB4AP04350 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TUBB4AP04350 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.1■□□□□ 0.01
TUBB4AP04350 AC090386.2-201ENST00000623010 1039 ntBASIC15.1■□□□□ 0.01
TUBB4AP04350 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.1■□□□□ 0.01
TUBB4AP04350 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TUBB4AP04350 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TUBB4AP04350 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TUBB4AP04350 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TUBB4AP04350 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC15.1■□□□□ 0.01
TUBB4AP04350 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC15.1■□□□□ 0.01
TUBB4AP04350 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TUBB4AP04350 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
TUBB4AP04350 MICA-210ENST00000616296 2260 ntTSL 5 BASIC15.1■□□□□ 0.01
TUBB4AP04350 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TUBB4AP04350 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TUBB4AP04350 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.1■□□□□ 0.01
TUBB4AP04350 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.1■□□□□ 0.01
TUBB4AP04350 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TUBB4AP04350 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TUBB4AP04350 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TUBB4AP04350 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TUBB4AP04350 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TUBB4AP04350 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TUBB4AP04350 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC15.09■□□□□ 0.01
TUBB4AP04350 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TUBB4AP04350 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TUBB4AP04350 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TUBB4AP04350 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TUBB4AP04350 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TUBB4AP04350 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TUBB4AP04350 AC107890.1-201ENST00000422478 521 ntBASIC15.09■□□□□ 0.01
TUBB4AP04350 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.09■□□□□ 0.01
TUBB4AP04350 SPDYE18-201ENST00000510091 1050 ntBASIC15.09■□□□□ 0.01
TUBB4AP04350 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.09■□□□□ 0.01
TUBB4AP04350 TPRX2P-201ENST00000535362 881 ntBASIC15.09■□□□□ 0.01
TUBB4AP04350 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.09■□□□□ 0.01
TUBB4AP04350 AC135586.1-201ENST00000539323 574 ntBASIC15.09■□□□□ 0.01
TUBB4AP04350 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.09■□□□□ 0.01
TUBB4AP04350 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TUBB4AP04350 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TUBB4AP04350 AC009407.1-201ENST00000568958 598 ntBASIC15.09■□□□□ 0.01
TUBB4AP04350 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TUBB4AP04350 AL356740.1-201ENST00000602192 1297 ntBASIC15.09■□□□□ 0.01
TUBB4AP04350 AL158211.3-201ENST00000607385 239 ntBASIC15.09■□□□□ 0.01
TUBB4AP04350 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.09■□□□□ 0.01
TUBB4AP04350 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TUBB4AP04350 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.09■□□□□ 0.01
TUBB4AP04350 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TUBB4AP04350 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TUBB4AP04350 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TUBB4AP04350 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TUBB4AP04350 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TUBB4AP04350 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TUBB4AP04350 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TUBB4AP04350 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TUBB4AP04350 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
TUBB4AP04350 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TUBB4AP04350 AC006033.2-201ENST00000609522 1968 ntTSL 2 BASIC15.09■□□□□ 0.01
TUBB4AP04350 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TUBB4AP04350 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TUBB4AP04350 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TUBB4AP04350 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TUBB4AP04350 ZBTB26-201ENST00000373654 2047 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TUBB4AP04350 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TUBB4AP04350 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
TUBB4AP04350 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TUBB4AP04350 SLC13A2-201ENST00000314669 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TUBB4AP04350 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TUBB4AP04350 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
TUBB4AP04350 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC15.08■□□□□ 0.01
TUBB4AP04350 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.08■□□□□ 0.01
TUBB4AP04350 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TUBB4AP04350 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
TUBB4AP04350 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
TUBB4AP04350 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC15.08■□□□□ 0.01
TUBB4AP04350 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0.01
TUBB4AP04350 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TUBB4AP04350 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
TUBB4AP04350 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
TUBB4AP04350 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.08■□□□□ 0
TUBB4AP04350 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
TUBB4AP04350 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.08■□□□□ 0
TUBB4AP04350 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.08■□□□□ 0
TUBB4AP04350 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC15.08■□□□□ 0
TUBB4AP04350 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.08■□□□□ 0
TUBB4AP04350 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
TUBB4AP04350 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.08■□□□□ 0
TUBB4AP04350 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.08■□□□□ 0
TUBB4AP04350 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.08■□□□□ 0
TUBB4AP04350 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.08■□□□□ 0
TUBB4AP04350 AP001063.1-201ENST00000568332 529 ntBASIC15.08■□□□□ 0
TUBB4AP04350 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.08■□□□□ 0
TUBB4AP04350 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms