Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC11.84□□□□□ -0.51
CD74P04233 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD74P04233 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
CD74P04233 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
CD74P04233 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CD74P04233 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD74P04233 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CD74P04233 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CD74P04233 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CD74P04233 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
CD74P04233 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CD74P04233 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD74P04233 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD74P04233 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
CD74P04233 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD74P04233 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD74P04233 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC11.84□□□□□ -0.51
CD74P04233 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD74P04233 AC093462.1-201ENST00000621167 1683 ntBASIC11.84□□□□□ -0.51
CD74P04233 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC11.84□□□□□ -0.51
CD74P04233 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD74P04233 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD74P04233 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
CD74P04233 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
CD74P04233 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC11.83□□□□□ -0.51
CD74P04233 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC11.83□□□□□ -0.51
CD74P04233 PXK-210ENST00000479241 2817 ntTSL 2 BASIC11.83□□□□□ -0.52
CD74P04233 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CD74P04233 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD74P04233 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CD74P04233 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CD74P04233 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD74P04233 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD74P04233 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
CD74P04233 AL391825.1-201ENST00000457671 1364 ntBASIC11.83□□□□□ -0.52
CD74P04233 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
CD74P04233 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD74P04233 MICA-210ENST00000616296 2260 ntTSL 5 BASIC11.83□□□□□ -0.52
CD74P04233 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD74P04233 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD74P04233 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CD74P04233 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CD74P04233 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC11.83□□□□□ -0.52
CD74P04233 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
CD74P04233 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC11.83□□□□□ -0.52
CD74P04233 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD74P04233 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CD74P04233 RBM38-204ENST00000371219 760 ntTSL 2 BASIC11.83□□□□□ -0.52
CD74P04233 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD74P04233 HLA-DRB6-201ENST00000411500 1235 ntBASIC11.83□□□□□ -0.52
CD74P04233 BAATP1-201ENST00000412284 1225 ntBASIC11.83□□□□□ -0.52
CD74P04233 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC11.83□□□□□ -0.52
CD74P04233 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC11.83□□□□□ -0.52
CD74P04233 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC11.83□□□□□ -0.52
CD74P04233 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC11.83□□□□□ -0.52
CD74P04233 FAM8A4P-201ENST00000435433 1213 ntBASIC11.83□□□□□ -0.52
CD74P04233 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC11.83□□□□□ -0.52
CD74P04233 AL512638.1-201ENST00000457493 794 ntBASIC11.83□□□□□ -0.52
CD74P04233 GOLGA2P8-201ENST00000505201 779 ntBASIC11.83□□□□□ -0.52
CD74P04233 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC11.83□□□□□ -0.52
CD74P04233 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
CD74P04233 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC11.83□□□□□ -0.52
CD74P04233 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
CD74P04233 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC11.83□□□□□ -0.52
CD74P04233 PAM16-204ENST00000571941 674 ntTSL 3 BASIC11.83□□□□□ -0.52
CD74P04233 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC11.83□□□□□ -0.52
CD74P04233 AL591471.1-201ENST00000621855 229 ntBASIC11.83□□□□□ -0.52
CD74P04233 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC11.83□□□□□ -0.52
CD74P04233 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD74P04233 CICP9-201ENST00000444451 1913 ntBASIC11.83□□□□□ -0.52
CD74P04233 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC11.83□□□□□ -0.52
CD74P04233 IL9RP3-201ENST00000442856 1674 ntBASIC11.83□□□□□ -0.52
CD74P04233 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD74P04233 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD74P04233 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC11.83□□□□□ -0.52
CD74P04233 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD74P04233 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD74P04233 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
CD74P04233 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD74P04233 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CD74P04233 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CD74P04233 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD74P04233 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
CD74P04233 AC134312.5-201ENST00000568031 1313 ntBASIC11.83□□□□□ -0.52
CD74P04233 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD74P04233 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CD74P04233 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
CD74P04233 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC11.83□□□□□ -0.52
CD74P04233 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD74P04233 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CD74P04233 MIR193BHG-211ENST00000641433 5365 ntBASIC11.82□□□□□ -0.52
CD74P04233 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC11.82□□□□□ -0.52
CD74P04233 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CD74P04233 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CD74P04233 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
CD74P04233 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CD74P04233 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CD74P04233 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
CD74P04233 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CD74P04233 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms