Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 RAB17-203ENST00000409576 466 ntTSL 3 BASIC10.68□□□□□ -0.7
COLCA2A8K830 TOMM22P5-201ENST00000416399 439 ntBASIC10.68□□□□□ -0.7
COLCA2A8K830 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC10.68□□□□□ -0.7
COLCA2A8K830 FGFR3P6-201ENST00000457012 610 ntBASIC10.68□□□□□ -0.7
COLCA2A8K830 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC10.68□□□□□ -0.7
COLCA2A8K830 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
COLCA2A8K830 AC026369.2-201ENST00000540136 1101 ntTSL 3 BASIC10.68□□□□□ -0.7
COLCA2A8K830 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC10.68□□□□□ -0.7
COLCA2A8K830 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC10.68□□□□□ -0.7
COLCA2A8K830 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC10.68□□□□□ -0.7
COLCA2A8K830 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
COLCA2A8K830 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC10.68□□□□□ -0.7
COLCA2A8K830 AC068338.3-201ENST00000617892 418 ntBASIC10.68□□□□□ -0.7
COLCA2A8K830 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
COLCA2A8K830 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC10.68□□□□□ -0.7
COLCA2A8K830 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC10.68□□□□□ -0.7
COLCA2A8K830 LVRN-201ENST00000357872 4581 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
COLCA2A8K830 AC026469.1-201ENST00000621095 3306 ntBASIC10.68□□□□□ -0.7
COLCA2A8K830 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
COLCA2A8K830 CHID1-205ENST00000454838 3255 ntTSL 5 BASIC10.68□□□□□ -0.7
COLCA2A8K830 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
COLCA2A8K830 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
COLCA2A8K830 TTN-AS1-209ENST00000456053 2033 ntTSL 2 BASIC10.68□□□□□ -0.7
COLCA2A8K830 AL365181.2-201ENST00000606343 3222 ntBASIC10.68□□□□□ -0.7
COLCA2A8K830 AL590483.3-201ENST00000623669 3580 ntBASIC10.68□□□□□ -0.7
COLCA2A8K830 LLGL2-205ENST00000577200 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
COLCA2A8K830 VPS16-202ENST00000380445 2750 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
COLCA2A8K830 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
COLCA2A8K830 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC10.68□□□□□ -0.7
COLCA2A8K830 LINC00319-202ENST00000448049 3507 ntTSL 5 BASIC10.68□□□□□ -0.7
COLCA2A8K830 SEPT10-203ENST00000397714 2719 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
COLCA2A8K830 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC10.68□□□□□ -0.7
COLCA2A8K830 ERCC1-202ENST00000300853 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
COLCA2A8K830 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
COLCA2A8K830 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
COLCA2A8K830 AP1G2-202ENST00000397120 2609 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
COLCA2A8K830 AC134682.1-201ENST00000569285 3377 ntBASIC10.68□□□□□ -0.7
COLCA2A8K830 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
COLCA2A8K830 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
COLCA2A8K830 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
COLCA2A8K830 LILRB3-202ENST00000346401 2204 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
COLCA2A8K830 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC10.68□□□□□ -0.7
COLCA2A8K830 CAPN10-AS1-201ENST00000567819 4000 ntBASIC10.68□□□□□ -0.7
COLCA2A8K830 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
COLCA2A8K830 ANKRD30BP2-202ENST00000447861 3260 ntTSL 2 BASIC10.68□□□□□ -0.7
COLCA2A8K830 FO681491.1-201ENST00000623586 3260 ntTSL 2 BASIC10.68□□□□□ -0.7
COLCA2A8K830 FUBP1-202ENST00000370767 2524 ntTSL 5 BASIC10.67□□□□□ -0.7
COLCA2A8K830 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
COLCA2A8K830 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
COLCA2A8K830 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
COLCA2A8K830 CTCFL-202ENST00000371196 3491 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
COLCA2A8K830 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
COLCA2A8K830 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
COLCA2A8K830 ERVMER34-1-201ENST00000440542 2744 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
COLCA2A8K830 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
COLCA2A8K830 PEX5L-213ENST00000476138 2361 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
COLCA2A8K830 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
COLCA2A8K830 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
COLCA2A8K830 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
COLCA2A8K830 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC10.67□□□□□ -0.7
COLCA2A8K830 DDX3P1-201ENST00000418231 1950 ntBASIC10.67□□□□□ -0.7
COLCA2A8K830 PCGF2-207ENST00000620225 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
COLCA2A8K830 NPNT-202ENST00000379987 4598 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
COLCA2A8K830 AC006144.1-201ENST00000424220 1600 ntBASIC10.67□□□□□ -0.7
COLCA2A8K830 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC10.67□□□□□ -0.7
COLCA2A8K830 SLCO2B1-204ENST00000454962 3219 ntTSL 2 BASIC10.67□□□□□ -0.7
COLCA2A8K830 AL606970.1-201ENST00000445442 2559 ntTSL 3 BASIC10.67□□□□□ -0.7
COLCA2A8K830 TACC1-211ENST00000520973 2564 ntTSL 2 BASIC10.67□□□□□ -0.7
COLCA2A8K830 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
COLCA2A8K830 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC10.67□□□□□ -0.7
COLCA2A8K830 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC10.67□□□□□ -0.7
COLCA2A8K830 PRSS29P-201ENST00000440800 595 ntBASIC10.67□□□□□ -0.7
COLCA2A8K830 AP002383.4-201ENST00000442518 975 ntBASIC10.67□□□□□ -0.7
COLCA2A8K830 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
COLCA2A8K830 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC10.67□□□□□ -0.7
COLCA2A8K830 HLA-J-203ENST00000494367 1087 ntBASIC10.67□□□□□ -0.7
COLCA2A8K830 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC10.67□□□□□ -0.7
COLCA2A8K830 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
COLCA2A8K830 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC10.67□□□□□ -0.7
COLCA2A8K830 AC027307.2-201ENST00000591252 911 ntBASIC10.67□□□□□ -0.7
COLCA2A8K830 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC10.67□□□□□ -0.7
COLCA2A8K830 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
COLCA2A8K830 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
COLCA2A8K830 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC10.67□□□□□ -0.7
COLCA2A8K830 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
COLCA2A8K830 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC10.67□□□□□ -0.7
COLCA2A8K830 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC10.67□□□□□ -0.7
COLCA2A8K830 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
COLCA2A8K830 SLC45A4-202ENST00000517878 3470 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
COLCA2A8K830 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
COLCA2A8K830 NOL10-205ENST00000538384 3418 ntTSL 2 BASIC10.67□□□□□ -0.7
COLCA2A8K830 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC10.67□□□□□ -0.7
COLCA2A8K830 ZNHIT6-201ENST00000370574 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
COLCA2A8K830 NUTM2B-202ENST00000372321 3970 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
COLCA2A8K830 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC10.67□□□□□ -0.7
COLCA2A8K830 ESR2-213ENST00000557772 5458 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
COLCA2A8K830 TIAM2-206ENST00000456877 3275 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
COLCA2A8K830 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
COLCA2A8K830 TMEM174-201ENST00000296776 1759 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
COLCA2A8K830 CYP1A1-202ENST00000395048 2608 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms