Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CALCOCO1Q9P1Z2 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CALCOCO1Q9P1Z2 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.54■□□□□ 0.08
CALCOCO1Q9P1Z2 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.54■□□□□ 0.08
CALCOCO1Q9P1Z2 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CALCOCO1Q9P1Z2 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CALCOCO1Q9P1Z2 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CALCOCO1Q9P1Z2 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 AC012531.1-201ENST00000562848 2680 ntBASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 KRT8P13-201ENST00000463294 1010 ntBASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 COX5BP1-201ENST00000507622 393 ntBASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 GCOM2-201ENST00000509133 1104 ntBASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 RN7SL713P-201ENST00000582127 302 ntBASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 AL022328.3-201ENST00000607943 679 ntBASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CALCOCO1Q9P1Z2 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 SUPT20HL1-201ENST00000436466 2618 ntBASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 CNN2P10-201ENST00000443067 918 ntBASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 AC104306.2-201ENST00000451877 341 ntBASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.52■□□□□ 0.08
CALCOCO1Q9P1Z2 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.52■□□□□ 0.07
CALCOCO1Q9P1Z2 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC15.52■□□□□ 0.07
CALCOCO1Q9P1Z2 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CALCOCO1Q9P1Z2 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CALCOCO1Q9P1Z2 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms