Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 AL118506.1-201ENST00000601296 3082 ntBASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 POM121L10P-201ENST00000436994 1285 ntBASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 CTBP2P5-201ENST00000454986 1264 ntBASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 DUX4L45-201ENST00000566406 1057 ntBASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 AC005962.1-201ENST00000584100 773 ntBASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 AL162274.1-201ENST00000617191 1098 ntBASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 AP000437.1-201ENST00000624057 2085 ntBASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 AC004623.1-201ENST00000624592 2127 ntBASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 KRT18P36-201ENST00000411618 1276 ntBASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 XBP1P1-201ENST00000436573 652 ntBASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 KLF2P1-201ENST00000447438 1042 ntBASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 MIR4783-201ENST00000580343 82 ntBASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 AL023803.2-201ENST00000620080 638 ntBASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 AL358781.1-202ENST00000321081 1360 ntBASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 AC073869.1-201ENST00000415574 2762 ntBASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
THUMPD1Q9NXG2 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms