Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 AC016397.2-201ENST00000624848 1985 ntBASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 SPTLC1P5-201ENST00000450718 252 ntBASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 DUX4L50-201ENST00000455245 715 ntBASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 AL022334.2-201ENST00000610000 484 ntBASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 MIR6769A-201ENST00000617340 73 ntBASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.69□□□□□ -0.38
PARPBPQ9NWS1 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 AL133338.1-201ENST00000565695 1517 ntBASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 RNA5SP359-201ENST00000364838 113 ntBASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 ISCA2P1-201ENST00000425548 448 ntBASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 AL596276.2-201ENST00000447525 331 ntBASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 AC093752.3-201ENST00000567343 901 ntBASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 IRF3-215ENST00000596822 823 ntTSL 3 BASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 LINC01783-202ENST00000614408 828 ntBASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 BX284668.2-205ENST00000619677 828 ntBASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 CU633904.3-201ENST00000624042 1029 ntBASIC12.68□□□□□ -0.38
PARPBPQ9NWS1 AL139099.5-201ENST00000635274 300 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms