Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 ABCD1P2-201ENST00000429313 1601 ntBASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UPF3BQ9BZI7 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 AC078875.1-201ENST00000431907 724 ntBASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 RN7SL277P-201ENST00000481521 288 ntBASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 JPT2-214ENST00000569765 782 ntTSL 2 BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 AC104982.3-201ENST00000581995 514 ntBASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 AC007663.3-201ENST00000609632 465 ntBASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 AC090164.2-201ENST00000611487 516 ntBASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 AL023803.2-201ENST00000620080 638 ntBASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 LINC00567-201ENST00000569854 3409 ntBASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPF3BQ9BZI7 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
UPF3BQ9BZI7 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
UPF3BQ9BZI7 ADAMTS7P1-201ENST00000613213 4793 ntBASIC16.83■□□□□ 0.29
UPF3BQ9BZI7 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.29
UPF3BQ9BZI7 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 AL391647.1-201ENST00000395664 511 ntBASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
UPF3BQ9BZI7 POM121L10P-201ENST00000436994 1285 ntBASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms