Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 RN7SKP214-201ENST00000364208 315 ntBASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 TUBB2BP1-201ENST00000404155 871 ntBASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 DUX4L50-201ENST00000455245 715 ntBASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 KRT8P1-201ENST00000557533 1207 ntBASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 NDUFB10P1-201ENST00000567319 521 ntBASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 NKG7-204ENST00000595217 816 ntTSL 2 BASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 HPN-206ENST00000597419 1212 ntTSL 5 BASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 Six3os1_5.1-201ENST00000611000 271 ntBASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 AC091271.1-201ENST00000611877 1162 ntBASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 AL136295.7-201ENST00000619226 1200 ntBASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RSPO3Q9BXY4 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.83□□□□□ -0.35
RSPO3Q9BXY4 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
RSPO3Q9BXY4 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
RSPO3Q9BXY4 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
RSPO3Q9BXY4 AL358781.1-202ENST00000321081 1360 ntBASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 KRT17P5-201ENST00000332088 839 ntBASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 HNRNPA1P41-201ENST00000397777 928 ntBASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 AC016700.1-201ENST00000429424 312 ntBASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 AC108725.1-201ENST00000495472 409 ntBASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 SLC25A15P3-201ENST00000505530 290 ntBASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 AC095040.1-201ENST00000513286 675 ntBASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 AL356740.1-201ENST00000602192 1297 ntBASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 GDA-203ENST00000376986 1771 ntTSL 2 BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 AGGF1P10-201ENST00000635005 2191 ntBASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 Z98257.2-202ENST00000641138 1548 ntBASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.83□□□□□ -0.36
RSPO3Q9BXY4 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms