Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 DNM1P50-201ENST00000565767 508 ntBASIC22.22■■□□□ 1.15
IFT140Q96RY7 RPL26-206ENST00000582556 763 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
IFT140Q96RY7 LINC00923-208ENST00000621777 503 ntTSL 5 BASIC22.22■■□□□ 1.15
IFT140Q96RY7 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
IFT140Q96RY7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
IFT140Q96RY7 NBEAP3-201ENST00000420638 1493 ntBASIC22.22■■□□□ 1.15
IFT140Q96RY7 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
IFT140Q96RY7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC22.22■■□□□ 1.15
IFT140Q96RY7 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
IFT140Q96RY7 BSCL2-203ENST00000360796 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
IFT140Q96RY7 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
IFT140Q96RY7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
IFT140Q96RY7 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
IFT140Q96RY7 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC22.22■■□□□ 1.15
IFT140Q96RY7 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
IFT140Q96RY7 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
IFT140Q96RY7 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
IFT140Q96RY7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
IFT140Q96RY7 IKZF3-211ENST00000394189 1552 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
IFT140Q96RY7 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC22.22■■□□□ 1.15
IFT140Q96RY7 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
IFT140Q96RY7 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
IFT140Q96RY7 GZMH-201ENST00000216338 909 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
IFT140Q96RY7 NHP2-201ENST00000274606 865 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
IFT140Q96RY7 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
IFT140Q96RY7 AL359094.2-201ENST00000420941 750 ntTSL 3 BASIC22.22■■□□□ 1.15
IFT140Q96RY7 MAP1LC3BP1-202ENST00000438342 516 ntTSL 3 BASIC22.22■■□□□ 1.15
IFT140Q96RY7 AC025178.1-201ENST00000503441 834 ntTSL 2 BASIC22.22■■□□□ 1.15
IFT140Q96RY7 SNAPC5-207ENST00000566658 574 ntAPPRIS ALT2 TSL 4 BASIC22.22■■□□□ 1.15
IFT140Q96RY7 CYP2B7P-202ENST00000593298 1087 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
IFT140Q96RY7 AC025165.4-201ENST00000602327 433 ntBASIC22.22■■□□□ 1.15
IFT140Q96RY7 PSMG3-AS1-207ENST00000612019 586 ntTSL 4 BASIC22.22■■□□□ 1.15
IFT140Q96RY7 MECP2-226ENST00000640414 897 ntTSL 5 BASIC22.22■■□□□ 1.15
IFT140Q96RY7 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
IFT140Q96RY7 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC22.21■■□□□ 1.15
IFT140Q96RY7 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
IFT140Q96RY7 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
IFT140Q96RY7 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
IFT140Q96RY7 AC012617.1-204ENST00000586340 2305 ntBASIC22.21■■□□□ 1.15
IFT140Q96RY7 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
IFT140Q96RY7 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
IFT140Q96RY7 KLHDC2-211ENST00000557247 1565 ntTSL 5 BASIC22.21■■□□□ 1.15
IFT140Q96RY7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC22.21■■□□□ 1.15
IFT140Q96RY7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC22.21■■□□□ 1.15
IFT140Q96RY7 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC22.21■■□□□ 1.15
IFT140Q96RY7 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
IFT140Q96RY7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
IFT140Q96RY7 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
IFT140Q96RY7 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC22.21■■□□□ 1.15
IFT140Q96RY7 CYP2B7P-201ENST00000541697 1476 ntBASIC22.21■■□□□ 1.15
IFT140Q96RY7 GEMIN8-203ENST00000398355 1119 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
IFT140Q96RY7 RPP30-203ENST00000413330 1004 ntTSL 5 BASIC22.21■■□□□ 1.15
IFT140Q96RY7 AK2P2-201ENST00000439142 405 ntBASIC22.21■■□□□ 1.15
IFT140Q96RY7 AC234582.2-201ENST00000455788 568 ntTSL 3 BASIC22.21■■□□□ 1.15
IFT140Q96RY7 MOG-229ENST00000483013 279 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
IFT140Q96RY7 MOG-232ENST00000490427 327 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
IFT140Q96RY7 AC138035.2-201ENST00000509192 727 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
IFT140Q96RY7 OVOL1-AS1-203ENST00000534178 493 ntTSL 2 BASIC22.21■■□□□ 1.15
IFT140Q96RY7 AC131009.2-201ENST00000542763 770 ntTSL 3 BASIC22.21■■□□□ 1.15
IFT140Q96RY7 RN7SL750P-201ENST00000582814 238 ntBASIC22.21■■□□□ 1.15
IFT140Q96RY7 LINC02193-207ENST00000621799 723 ntTSL 5 BASIC22.21■■□□□ 1.15
IFT140Q96RY7 AC069287.1-202ENST00000622626 723 ntTSL 5 BASIC22.21■■□□□ 1.15
IFT140Q96RY7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
IFT140Q96RY7 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
IFT140Q96RY7 MRFAP1L1-201ENST00000320848 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
IFT140Q96RY7 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
IFT140Q96RY7 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
IFT140Q96RY7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
IFT140Q96RY7 OR10K2-201ENST00000314902 939 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
IFT140Q96RY7 TRIM15-206ENST00000376688 426 ntTSL 5 BASIC22.2■■□□□ 1.14
IFT140Q96RY7 CD74-203ENST00000377795 1138 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
IFT140Q96RY7 AC007312.1-201ENST00000427493 258 ntBASIC22.2■■□□□ 1.14
IFT140Q96RY7 SYS1-DBNDD2-202ENST00000452133 674 ntAPPRIS ALT2 TSL 3 BASIC22.2■■□□□ 1.14
IFT140Q96RY7 AADAC-202ENST00000488869 719 ntTSL 2 BASIC22.2■■□□□ 1.14
IFT140Q96RY7 SPATA24-204ENST00000507779 606 ntTSL 5 BASIC22.2■■□□□ 1.14
IFT140Q96RY7 ASS1P9-201ENST00000513426 1236 ntBASIC22.2■■□□□ 1.14
IFT140Q96RY7 IFI27L1-209ENST00000555523 680 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
IFT140Q96RY7 LINC00662-204ENST00000588027 562 ntTSL 5 BASIC22.2■■□□□ 1.14
IFT140Q96RY7 AC012313.2-201ENST00000599952 1154 ntTSL 5 BASIC22.2■■□□□ 1.14
IFT140Q96RY7 AC097634.2-201ENST00000615819 604 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
IFT140Q96RY7 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC22.2■■□□□ 1.14
IFT140Q96RY7 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
IFT140Q96RY7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
IFT140Q96RY7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC22.2■■□□□ 1.14
IFT140Q96RY7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
IFT140Q96RY7 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
IFT140Q96RY7 IDH3A-207ENST00000558554 1595 ntTSL 2 BASIC22.2■■□□□ 1.14
IFT140Q96RY7 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC22.2■■□□□ 1.14
IFT140Q96RY7 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
IFT140Q96RY7 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC22.2■■□□□ 1.14
IFT140Q96RY7 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
IFT140Q96RY7 RNF4-216ENST00000511859 1373 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
IFT140Q96RY7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
IFT140Q96RY7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
IFT140Q96RY7 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC22.19■■□□□ 1.14
IFT140Q96RY7 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
IFT140Q96RY7 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
IFT140Q96RY7 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
IFT140Q96RY7 RABL2B-203ENST00000395591 1987 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
IFT140Q96RY7 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms