Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 SPCS2-209ENST00000610881 2711 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 INTS6L-201ENST00000370752 3793 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 KRT8P28-201ENST00000433288 1390 ntBASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 HYLS1-202ENST00000425380 2061 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 ZNF142-205ENST00000449707 5909 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 GRM4-209ENST00000609222 3176 ntTSL 2 BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 SLC25A25-205ENST00000432073 3678 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 SV2A-202ENST00000369146 4416 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 FSCN3-201ENST00000265825 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 ADAMTS10-211ENST00000597188 3749 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 WDR47-201ENST00000357672 4144 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 UBTF-206ENST00000527034 3010 ntTSL 5 BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 MARCH10-209ENST00000583600 3214 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 ATG7-213ENST00000446450 2042 ntTSL 2 BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 CPNE4-201ENST00000429747 4184 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 KRT18P3-201ENST00000451602 1288 ntBASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 AC026410.3-201ENST00000514280 936 ntBASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 KRT8P48-201ENST00000515599 1220 ntBASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 AL662844.1-201ENST00000546340 181 ntBASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 DET1-205ENST00000558413 583 ntTSL 4 BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 AC087388.1-201ENST00000571370 1112 ntBASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 AC091812.2-201ENST00000619081 385 ntBASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 NTM-206ENST00000427481 2583 ntTSL 5 BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 PM20D1-201ENST00000367136 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 AL590824.1-201ENST00000403828 1349 ntBASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 PPP1R26P2-201ENST00000611403 3595 ntBASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 COL12A1-202ENST00000345356 5886 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 FAM161A-203ENST00000405894 3684 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 ILF3-219ENST00000590261 3219 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 EGLN3-205ENST00000547327 2849 ntBASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 AC245100.6-201ENST00000427169 1918 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 GOLGA8O-201ENST00000509311 1997 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC10.23□□□□□ -0.77
CHCHD1Q96BP2 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC10.22□□□□□ -0.77
CHCHD1Q96BP2 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
CHCHD1Q96BP2 AC005696.4-201ENST00000614400 3147 ntBASIC10.22□□□□□ -0.77
CHCHD1Q96BP2 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
CHCHD1Q96BP2 NBPF17P-201ENST00000401087 2119 ntBASIC10.22□□□□□ -0.77
CHCHD1Q96BP2 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
CHCHD1Q96BP2 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CHCHD1Q96BP2 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC10.22□□□□□ -0.77
CHCHD1Q96BP2 MAP1S-202ENST00000544059 3399 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
CHCHD1Q96BP2 DENND1C-201ENST00000381480 2816 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms