Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.28□□□□□ -0.44
CCDC107Q8WV48 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC107Q8WV48 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.28□□□□□ -0.44
CCDC107Q8WV48 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.28□□□□□ -0.44
CCDC107Q8WV48 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.28□□□□□ -0.44
CCDC107Q8WV48 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.28□□□□□ -0.44
CCDC107Q8WV48 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.28□□□□□ -0.44
CCDC107Q8WV48 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.28□□□□□ -0.44
CCDC107Q8WV48 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.28□□□□□ -0.44
CCDC107Q8WV48 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC107Q8WV48 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC107Q8WV48 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.28□□□□□ -0.44
CCDC107Q8WV48 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC107Q8WV48 AC125807.2-201ENST00000513358 3514 ntBASIC12.28□□□□□ -0.44
CCDC107Q8WV48 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.28□□□□□ -0.44
CCDC107Q8WV48 AL359845.1-201ENST00000458202 1648 ntBASIC12.28□□□□□ -0.44
CCDC107Q8WV48 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CCDC107Q8WV48 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC107Q8WV48 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.28□□□□□ -0.44
CCDC107Q8WV48 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.28□□□□□ -0.44
CCDC107Q8WV48 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC12.28□□□□□ -0.44
CCDC107Q8WV48 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.28□□□□□ -0.44
CCDC107Q8WV48 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC107Q8WV48 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC107Q8WV48 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC107Q8WV48 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC107Q8WV48 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CCDC107Q8WV48 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC107Q8WV48 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
CCDC107Q8WV48 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.28□□□□□ -0.44
CCDC107Q8WV48 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC107Q8WV48 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC107Q8WV48 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC107Q8WV48 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
CCDC107Q8WV48 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCDC107Q8WV48 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
CCDC107Q8WV48 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCDC107Q8WV48 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCDC107Q8WV48 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC12.27□□□□□ -0.44
CCDC107Q8WV48 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCDC107Q8WV48 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCDC107Q8WV48 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CCDC107Q8WV48 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCDC107Q8WV48 AL022323.5-201ENST00000624101 2059 ntBASIC12.27□□□□□ -0.45
CCDC107Q8WV48 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
CCDC107Q8WV48 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC107Q8WV48 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC107Q8WV48 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC107Q8WV48 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC107Q8WV48 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.27□□□□□ -0.45
CCDC107Q8WV48 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CCDC107Q8WV48 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC107Q8WV48 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC107Q8WV48 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC107Q8WV48 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC107Q8WV48 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC107Q8WV48 C2orf27AP3-201ENST00000434123 579 ntBASIC12.27□□□□□ -0.45
CCDC107Q8WV48 AK2P2-201ENST00000439142 405 ntBASIC12.27□□□□□ -0.45
CCDC107Q8WV48 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC107Q8WV48 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC12.27□□□□□ -0.45
CCDC107Q8WV48 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.27□□□□□ -0.45
CCDC107Q8WV48 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
CCDC107Q8WV48 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
CCDC107Q8WV48 OR10B1P-201ENST00000601666 907 ntBASIC12.27□□□□□ -0.45
CCDC107Q8WV48 AL354718.3-201ENST00000616414 581 ntBASIC12.27□□□□□ -0.45
CCDC107Q8WV48 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC12.27□□□□□ -0.45
CCDC107Q8WV48 CR382287.1-201ENST00000623954 586 ntBASIC12.27□□□□□ -0.45
CCDC107Q8WV48 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
CCDC107Q8WV48 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC107Q8WV48 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC107Q8WV48 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC107Q8WV48 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CCDC107Q8WV48 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.45
CCDC107Q8WV48 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC107Q8WV48 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC107Q8WV48 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CCDC107Q8WV48 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC107Q8WV48 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC107Q8WV48 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC107Q8WV48 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC107Q8WV48 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC107Q8WV48 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC107Q8WV48 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC107Q8WV48 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC107Q8WV48 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCDC107Q8WV48 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.26□□□□□ -0.45
CCDC107Q8WV48 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms