Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
RNF135Q8IUD6 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
RNF135Q8IUD6 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RNF135Q8IUD6 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RNF135Q8IUD6 AC108734.2-201ENST00000420887 1069 ntBASIC14.98□□□□□ -0.01
RNF135Q8IUD6 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RNF135Q8IUD6 AC093826.1-201ENST00000508655 993 ntBASIC14.98□□□□□ -0.01
RNF135Q8IUD6 RNA5SP406-201ENST00000516106 112 ntBASIC14.98□□□□□ -0.01
RNF135Q8IUD6 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RNF135Q8IUD6 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RNF135Q8IUD6 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RNF135Q8IUD6 KRT8P1-201ENST00000557533 1207 ntBASIC14.98□□□□□ -0.01
RNF135Q8IUD6 CYP4F36P-201ENST00000589193 186 ntBASIC14.98□□□□□ -0.01
RNF135Q8IUD6 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RNF135Q8IUD6 AL118522.1-201ENST00000611368 560 ntBASIC14.98□□□□□ -0.01
RNF135Q8IUD6 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.98□□□□□ -0.01
RNF135Q8IUD6 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RNF135Q8IUD6 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RNF135Q8IUD6 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RNF135Q8IUD6 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RNF135Q8IUD6 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RNF135Q8IUD6 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RNF135Q8IUD6 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RNF135Q8IUD6 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
RNF135Q8IUD6 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
RNF135Q8IUD6 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.98□□□□□ -0.01
RNF135Q8IUD6 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RNF135Q8IUD6 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 TEKT4P2-202ENST00000559466 1312 ntBASIC14.97□□□□□ -0.01
RNF135Q8IUD6 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 AC027601.5-201ENST00000624065 2482 ntBASIC14.97□□□□□ -0.01
RNF135Q8IUD6 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 KRT18P46-201ENST00000435568 1279 ntBASIC14.97□□□□□ -0.01
RNF135Q8IUD6 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 VENTXP4-201ENST00000449029 958 ntBASIC14.97□□□□□ -0.01
RNF135Q8IUD6 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 RGS5-216ENST00000449680 788 ntTSL 3 BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 AC018638.5-201ENST00000450885 754 ntBASIC14.97□□□□□ -0.01
RNF135Q8IUD6 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 EMC4-208ENST00000559078 599 ntTSL 3 BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 NAV1-210ENST00000593583 726 ntBASIC14.97□□□□□ -0.01
RNF135Q8IUD6 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 AC006372.4-201ENST00000624122 1543 ntBASIC14.97□□□□□ -0.01
RNF135Q8IUD6 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.97□□□□□ -0.01
RNF135Q8IUD6 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RNF135Q8IUD6 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.96□□□□□ -0.01
RNF135Q8IUD6 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF135Q8IUD6 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.96□□□□□ -0.01
RNF135Q8IUD6 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF135Q8IUD6 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF135Q8IUD6 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF135Q8IUD6 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms