Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AL118522.1-201ENST00000611368 560 ntBASIC15.67■□□□□ 0.1
TRIM50Q86XT4 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.67■□□□□ 0.1
TRIM50Q86XT4 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM50Q86XT4 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM50Q86XT4 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM50Q86XT4 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM50Q86XT4 GOLGA8UP-201ENST00000527159 1755 ntBASIC15.67■□□□□ 0.1
TRIM50Q86XT4 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
TRIM50Q86XT4 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM50Q86XT4 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM50Q86XT4 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 AC138969.2-201ENST00000532739 9932 ntBASIC15.66■□□□□ 0.1
TRIM50Q86XT4 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 RPL35P9-201ENST00000446059 350 ntBASIC15.66■□□□□ 0.1
TRIM50Q86XT4 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 RN7SL396P-201ENST00000471086 295 ntBASIC15.66■□□□□ 0.1
TRIM50Q86XT4 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 AC093826.1-201ENST00000508655 993 ntBASIC15.66■□□□□ 0.1
TRIM50Q86XT4 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 AL359091.4-201ENST00000610052 409 ntBASIC15.66■□□□□ 0.1
TRIM50Q86XT4 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 AC021305.1-201ENST00000520656 1514 ntBASIC15.66■□□□□ 0.1
TRIM50Q86XT4 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM50Q86XT4 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 EML1-203ENST00000334192 4064 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 ST20-AS1-201ENST00000560255 4223 ntBASIC15.65■□□□□ 0.1
TRIM50Q86XT4 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 PHB-210ENST00000511832 1509 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 PGAM1P12-201ENST00000505622 748 ntBASIC15.65■□□□□ 0.1
TRIM50Q86XT4 EEF1GP8-201ENST00000506566 1154 ntBASIC15.65■□□□□ 0.1
TRIM50Q86XT4 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 VENTXP3-201ENST00000546480 773 ntBASIC15.65■□□□□ 0.1
TRIM50Q86XT4 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms