Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC15.03■□□□□ -0
CTC1Q2NKJ3 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
CTC1Q2NKJ3 KRT8P2-201ENST00000556193 944 ntBASIC15.03■□□□□ -0
CTC1Q2NKJ3 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.03■□□□□ -0
CTC1Q2NKJ3 USP31-203ENST00000567975 2142 ntTSL 2 BASIC15.03■□□□□ -0
CTC1Q2NKJ3 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.03■□□□□ -0
CTC1Q2NKJ3 GAS7-216ENST00000583882 553 ntTSL 5 BASIC15.03■□□□□ -0
CTC1Q2NKJ3 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC15.03■□□□□ -0
CTC1Q2NKJ3 NAV1-210ENST00000593583 726 ntBASIC15.03■□□□□ -0
CTC1Q2NKJ3 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CTC1Q2NKJ3 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC15.03■□□□□ -0
CTC1Q2NKJ3 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CTC1Q2NKJ3 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.03■□□□□ -0
CTC1Q2NKJ3 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CTC1Q2NKJ3 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CTC1Q2NKJ3 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CTC1Q2NKJ3 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CTC1Q2NKJ3 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CTC1Q2NKJ3 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CTC1Q2NKJ3 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.03■□□□□ -0
CTC1Q2NKJ3 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CTC1Q2NKJ3 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CTC1Q2NKJ3 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC15.02■□□□□ -0
CTC1Q2NKJ3 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC15.02■□□□□ -0
CTC1Q2NKJ3 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC15.02■□□□□ -0
CTC1Q2NKJ3 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CTC1Q2NKJ3 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.02■□□□□ -0
CTC1Q2NKJ3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.02■□□□□ -0
CTC1Q2NKJ3 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CTC1Q2NKJ3 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CTC1Q2NKJ3 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.02■□□□□ -0
CTC1Q2NKJ3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CTC1Q2NKJ3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CTC1Q2NKJ3 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CTC1Q2NKJ3 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC15.02■□□□□ -0
CTC1Q2NKJ3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CTC1Q2NKJ3 AL356585.2-201ENST00000625078 2396 ntBASIC15.02■□□□□ -0
CTC1Q2NKJ3 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.02■□□□□ -0
CTC1Q2NKJ3 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CTC1Q2NKJ3 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC15.02■□□□□ -0
CTC1Q2NKJ3 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC15.02■□□□□ -0
CTC1Q2NKJ3 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CTC1Q2NKJ3 AL929302.1-201ENST00000426556 871 ntBASIC15.02■□□□□ -0
CTC1Q2NKJ3 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC15.02■□□□□ -0
CTC1Q2NKJ3 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC15.02■□□□□ -0
CTC1Q2NKJ3 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC15.02■□□□□ -0
CTC1Q2NKJ3 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.02■□□□□ -0
CTC1Q2NKJ3 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC15.02■□□□□ -0
CTC1Q2NKJ3 AC023906.1-201ENST00000486386 453 ntBASIC15.02■□□□□ -0
CTC1Q2NKJ3 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC15.02■□□□□ -0
CTC1Q2NKJ3 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.02■□□□□ -0
CTC1Q2NKJ3 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC15.02■□□□□ -0
CTC1Q2NKJ3 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC15.02■□□□□ -0
CTC1Q2NKJ3 COX5A-205ENST00000568517 582 ntTSL 3 BASIC15.02■□□□□ -0
CTC1Q2NKJ3 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC15.02■□□□□ -0
CTC1Q2NKJ3 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC15.02■□□□□ -0
CTC1Q2NKJ3 TP53-221ENST00000615910 1149 ntTSL 5 BASIC15.02■□□□□ -0
CTC1Q2NKJ3 MIR6816-201ENST00000620368 66 ntBASIC15.02■□□□□ -0
CTC1Q2NKJ3 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CTC1Q2NKJ3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CTC1Q2NKJ3 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.02□□□□□ -0.01
CTC1Q2NKJ3 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CTC1Q2NKJ3 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CTC1Q2NKJ3 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CTC1Q2NKJ3 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CTC1Q2NKJ3 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CTC1Q2NKJ3 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CTC1Q2NKJ3 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
CTC1Q2NKJ3 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CTC1Q2NKJ3 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CTC1Q2NKJ3 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.02□□□□□ -0.01
CTC1Q2NKJ3 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CTC1Q2NKJ3 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
CTC1Q2NKJ3 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CTC1Q2NKJ3 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CTC1Q2NKJ3 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.01□□□□□ -0.01
CTC1Q2NKJ3 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CTC1Q2NKJ3 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CTC1Q2NKJ3 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC15.01□□□□□ -0.01
CTC1Q2NKJ3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CTC1Q2NKJ3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
CTC1Q2NKJ3 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC15.01□□□□□ -0.01
CTC1Q2NKJ3 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CTC1Q2NKJ3 AC130686.1-201ENST00000622936 2466 ntBASIC15.01□□□□□ -0.01
CTC1Q2NKJ3 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CTC1Q2NKJ3 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CTC1Q2NKJ3 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CTC1Q2NKJ3 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CTC1Q2NKJ3 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CTC1Q2NKJ3 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.01□□□□□ -0.01
CTC1Q2NKJ3 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CTC1Q2NKJ3 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.01□□□□□ -0.01
CTC1Q2NKJ3 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CTC1Q2NKJ3 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC15.01□□□□□ -0.01
CTC1Q2NKJ3 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC15.01□□□□□ -0.01
CTC1Q2NKJ3 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC15.01□□□□□ -0.01
CTC1Q2NKJ3 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CTC1Q2NKJ3 TPT1P11-201ENST00000458482 498 ntBASIC15.01□□□□□ -0.01
CTC1Q2NKJ3 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CTC1Q2NKJ3 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms