Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIX1Q15475 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIX1Q15475 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC14.44□□□□□ -0.1
SIX1Q15475 AC018735.1-201ENST00000437208 1502 ntBASIC14.44□□□□□ -0.1
SIX1Q15475 PKD1P5-201ENST00000532415 10291 ntBASIC14.44□□□□□ -0.1
SIX1Q15475 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIX1Q15475 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SIX1Q15475 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SIX1Q15475 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC14.44□□□□□ -0.1
SIX1Q15475 AC007336.3-201ENST00000623886 2160 ntBASIC14.44□□□□□ -0.1
SIX1Q15475 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIX1Q15475 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
SIX1Q15475 FLJ16779-201ENST00000612722 7638 ntBASIC14.44□□□□□ -0.1
SIX1Q15475 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIX1Q15475 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIX1Q15475 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SIX1Q15475 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC14.44□□□□□ -0.1
SIX1Q15475 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.44□□□□□ -0.1
SIX1Q15475 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SIX1Q15475 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC14.43□□□□□ -0.1
SIX1Q15475 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX1Q15475 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SIX1Q15475 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX1Q15475 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SIX1Q15475 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX1Q15475 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SIX1Q15475 AC012531.1-201ENST00000562848 2680 ntBASIC14.43□□□□□ -0.1
SIX1Q15475 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
SIX1Q15475 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX1Q15475 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.43□□□□□ -0.1
SIX1Q15475 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SIX1Q15475 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX1Q15475 GDA-203ENST00000376986 1771 ntTSL 2 BASIC14.43□□□□□ -0.1
SIX1Q15475 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SIX1Q15475 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX1Q15475 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SIX1Q15475 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX1Q15475 DPM3-202ENST00000368399 517 ntBASIC14.43□□□□□ -0.1
SIX1Q15475 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.43□□□□□ -0.1
SIX1Q15475 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.43□□□□□ -0.1
SIX1Q15475 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SIX1Q15475 AC005034.1-201ENST00000426657 489 ntBASIC14.43□□□□□ -0.1
SIX1Q15475 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.43□□□□□ -0.1
SIX1Q15475 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SIX1Q15475 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SIX1Q15475 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC14.43□□□□□ -0.1
SIX1Q15475 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC14.43□□□□□ -0.1
SIX1Q15475 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.43□□□□□ -0.1
SIX1Q15475 ACA64.2-201ENST00000459014 129 ntBASIC14.43□□□□□ -0.1
SIX1Q15475 FAM86HP-204ENST00000513466 959 ntBASIC14.43□□□□□ -0.1
SIX1Q15475 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.43□□□□□ -0.1
SIX1Q15475 MIR4259-201ENST00000584466 101 ntBASIC14.43□□□□□ -0.1
SIX1Q15475 AL132994.2-201ENST00000603120 687 ntBASIC14.43□□□□□ -0.1
SIX1Q15475 AC012645.4-201ENST00000610691 1061 ntBASIC14.43□□□□□ -0.1
SIX1Q15475 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SIX1Q15475 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SIX1Q15475 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX1Q15475 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX1Q15475 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX1Q15475 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC14.43□□□□□ -0.1
SIX1Q15475 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SIX1Q15475 C2-209ENST00000452323 1999 ntTSL 2 BASIC14.43□□□□□ -0.1
SIX1Q15475 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SIX1Q15475 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SIX1Q15475 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SIX1Q15475 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SIX1Q15475 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX1Q15475 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC14.43□□□□□ -0.1
SIX1Q15475 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX1Q15475 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX1Q15475 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX1Q15475 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SIX1Q15475 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SIX1Q15475 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC14.42□□□□□ -0.1
SIX1Q15475 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
SIX1Q15475 AC063926.2-201ENST00000623766 1308 ntBASIC14.42□□□□□ -0.1
SIX1Q15475 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SIX1Q15475 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SIX1Q15475 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SIX1Q15475 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
SIX1Q15475 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SIX1Q15475 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SIX1Q15475 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SIX1Q15475 AL022323.5-201ENST00000624101 2059 ntBASIC14.42□□□□□ -0.1
SIX1Q15475 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SIX1Q15475 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SIX1Q15475 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SIX1Q15475 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SIX1Q15475 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SIX1Q15475 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.42□□□□□ -0.1
SIX1Q15475 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC14.42□□□□□ -0.1
SIX1Q15475 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.42□□□□□ -0.1
SIX1Q15475 Z93015.1-201ENST00000451718 390 ntBASIC14.42□□□□□ -0.1
SIX1Q15475 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.42□□□□□ -0.1
SIX1Q15475 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.42□□□□□ -0.1
SIX1Q15475 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.42□□□□□ -0.1
SIX1Q15475 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.42□□□□□ -0.1
SIX1Q15475 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SIX1Q15475 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SIX1Q15475 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms