Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC12.46□□□□□ -0.41
SEC61A1P61619 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC61A1P61619 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
SEC61A1P61619 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SEC61A1P61619 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC61A1P61619 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC61A1P61619 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC61A1P61619 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC61A1P61619 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.46□□□□□ -0.42
SEC61A1P61619 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.46□□□□□ -0.42
SEC61A1P61619 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SEC61A1P61619 AC011840.2-201ENST00000563063 1520 ntBASIC12.46□□□□□ -0.42
SEC61A1P61619 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.46□□□□□ -0.42
SEC61A1P61619 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SEC61A1P61619 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
SEC61A1P61619 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
SEC61A1P61619 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.46□□□□□ -0.42
SEC61A1P61619 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
SEC61A1P61619 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SEC61A1P61619 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
SEC61A1P61619 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SEC61A1P61619 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
SEC61A1P61619 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
SEC61A1P61619 AGAP10P-201ENST00000454844 2418 ntBASIC12.46□□□□□ -0.42
SEC61A1P61619 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.46□□□□□ -0.42
SEC61A1P61619 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.45□□□□□ -0.42
SEC61A1P61619 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.45□□□□□ -0.42
SEC61A1P61619 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SEC61A1P61619 AL136172.1-201ENST00000598590 1394 ntBASIC12.45□□□□□ -0.42
SEC61A1P61619 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SEC61A1P61619 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC61A1P61619 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC12.45□□□□□ -0.42
SEC61A1P61619 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC61A1P61619 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SEC61A1P61619 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
SEC61A1P61619 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC61A1P61619 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC61A1P61619 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC61A1P61619 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.45□□□□□ -0.42
SEC61A1P61619 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SEC61A1P61619 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.45□□□□□ -0.42
SEC61A1P61619 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SEC61A1P61619 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC12.45□□□□□ -0.42
SEC61A1P61619 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC61A1P61619 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SEC61A1P61619 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC61A1P61619 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC61A1P61619 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC61A1P61619 AC104306.2-201ENST00000451877 341 ntBASIC12.45□□□□□ -0.42
SEC61A1P61619 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
SEC61A1P61619 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
SEC61A1P61619 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.45□□□□□ -0.42
SEC61A1P61619 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.45□□□□□ -0.42
SEC61A1P61619 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.45□□□□□ -0.42
SEC61A1P61619 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC12.45□□□□□ -0.42
SEC61A1P61619 FAM8A2P-201ENST00000528813 1142 ntBASIC12.45□□□□□ -0.42
SEC61A1P61619 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC12.45□□□□□ -0.42
SEC61A1P61619 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC61A1P61619 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC12.45□□□□□ -0.42
SEC61A1P61619 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SEC61A1P61619 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC12.45□□□□□ -0.42
SEC61A1P61619 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC12.45□□□□□ -0.42
SEC61A1P61619 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
SEC61A1P61619 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.45□□□□□ -0.42
SEC61A1P61619 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC12.45□□□□□ -0.42
SEC61A1P61619 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.45□□□□□ -0.42
SEC61A1P61619 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.45□□□□□ -0.42
SEC61A1P61619 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
SEC61A1P61619 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
SEC61A1P61619 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SEC61A1P61619 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC12.45□□□□□ -0.42
SEC61A1P61619 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC61A1P61619 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.45□□□□□ -0.42
SEC61A1P61619 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
SEC61A1P61619 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC61A1P61619 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC61A1P61619 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC61A1P61619 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC61A1P61619 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
SEC61A1P61619 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SEC61A1P61619 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.44□□□□□ -0.42
SEC61A1P61619 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
SEC61A1P61619 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SEC61A1P61619 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SEC61A1P61619 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
SEC61A1P61619 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.44□□□□□ -0.42
SEC61A1P61619 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.44□□□□□ -0.42
SEC61A1P61619 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC12.44□□□□□ -0.42
SEC61A1P61619 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC12.44□□□□□ -0.42
SEC61A1P61619 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC12.44□□□□□ -0.42
SEC61A1P61619 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SEC61A1P61619 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.44□□□□□ -0.42
SEC61A1P61619 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.44□□□□□ -0.42
SEC61A1P61619 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SEC61A1P61619 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SEC61A1P61619 POM121L14P-201ENST00000406100 1558 ntBASIC12.44□□□□□ -0.42
SEC61A1P61619 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.44□□□□□ -0.42
SEC61A1P61619 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.44□□□□□ -0.42
SEC61A1P61619 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SEC61A1P61619 AL445209.1-201ENST00000607269 3491 ntBASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms