Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
BRPF1P55201 AGAP12P-201ENST00000585227 2359 ntBASIC17.86■□□□□ 0.45
BRPF1P55201 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
BRPF1P55201 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BRPF1P55201 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
BRPF1P55201 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BRPF1P55201 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.85■□□□□ 0.45
BRPF1P55201 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BRPF1P55201 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
BRPF1P55201 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BRPF1P55201 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BRPF1P55201 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BRPF1P55201 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
BRPF1P55201 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
BRPF1P55201 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
BRPF1P55201 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BRPF1P55201 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC17.85■□□□□ 0.45
BRPF1P55201 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BRPF1P55201 AC018638.5-201ENST00000450885 754 ntBASIC17.85■□□□□ 0.45
BRPF1P55201 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BRPF1P55201 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC17.85■□□□□ 0.45
BRPF1P55201 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC17.85■□□□□ 0.45
BRPF1P55201 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC17.85■□□□□ 0.45
BRPF1P55201 MIR3940-201ENST00000579148 102 ntBASIC17.85■□□□□ 0.45
BRPF1P55201 AC103810.10-201ENST00000606504 343 ntBASIC17.85■□□□□ 0.45
BRPF1P55201 RNF146-211ENST00000609447 607 ntTSL 4 BASIC17.85■□□□□ 0.45
BRPF1P55201 TBC1D3J-201ENST00000620719 1426 ntBASIC17.85■□□□□ 0.45
BRPF1P55201 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
BRPF1P55201 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
BRPF1P55201 MYO15B-237ENST00000642007 4893 ntBASIC17.85■□□□□ 0.45
BRPF1P55201 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BRPF1P55201 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
BRPF1P55201 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BRPF1P55201 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BRPF1P55201 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRPF1P55201 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRPF1P55201 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRPF1P55201 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BRPF1P55201 DDC-204ENST00000426377 1700 ntTSL 3 BASIC17.84■□□□□ 0.45
BRPF1P55201 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRPF1P55201 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC17.84■□□□□ 0.45
BRPF1P55201 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRPF1P55201 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BRPF1P55201 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.84■□□□□ 0.45
BRPF1P55201 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRPF1P55201 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRPF1P55201 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRPF1P55201 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BRPF1P55201 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC17.84■□□□□ 0.45
BRPF1P55201 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BRPF1P55201 AL807761.2-201ENST00000422849 729 ntBASIC17.84■□□□□ 0.45
BRPF1P55201 EEF1DP2-201ENST00000433698 843 ntBASIC17.84■□□□□ 0.45
BRPF1P55201 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC17.84■□□□□ 0.45
BRPF1P55201 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC17.84■□□□□ 0.45
BRPF1P55201 BUD31-205ENST00000456893 512 ntTSL 5 BASIC17.84■□□□□ 0.45
BRPF1P55201 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC17.84■□□□□ 0.45
BRPF1P55201 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC17.84■□□□□ 0.45
BRPF1P55201 COQ10BP2-201ENST00000513804 724 ntBASIC17.84■□□□□ 0.45
BRPF1P55201 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC17.84■□□□□ 0.45
BRPF1P55201 IGHV3-37-201ENST00000518544 340 ntBASIC17.84■□□□□ 0.45
BRPF1P55201 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC17.84■□□□□ 0.45
BRPF1P55201 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
BRPF1P55201 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC17.84■□□□□ 0.45
BRPF1P55201 AL031713.1-201ENST00000564813 661 ntBASIC17.84■□□□□ 0.45
BRPF1P55201 AC132825.4-202ENST00000578792 434 ntBASIC17.84■□□□□ 0.45
BRPF1P55201 MIR4649-201ENST00000582839 64 ntBASIC17.84■□□□□ 0.45
BRPF1P55201 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC17.84■□□□□ 0.45
BRPF1P55201 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC17.84■□□□□ 0.45
BRPF1P55201 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
BRPF1P55201 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
BRPF1P55201 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRPF1P55201 CR383656.2-201ENST00000548656 2254 ntBASIC17.84■□□□□ 0.45
BRPF1P55201 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRPF1P55201 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRPF1P55201 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BRPF1P55201 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC17.84■□□□□ 0.45
BRPF1P55201 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC17.84■□□□□ 0.45
BRPF1P55201 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
BRPF1P55201 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC17.84■□□□□ 0.45
BRPF1P55201 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
BRPF1P55201 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
BRPF1P55201 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.45
BRPF1P55201 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
BRPF1P55201 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
BRPF1P55201 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
BRPF1P55201 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
BRPF1P55201 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
BRPF1P55201 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
BRPF1P55201 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC17.83■□□□□ 0.45
BRPF1P55201 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
BRPF1P55201 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
BRPF1P55201 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC17.83■□□□□ 0.45
BRPF1P55201 AC245140.2-201ENST00000624054 1939 ntBASIC17.83■□□□□ 0.44
BRPF1P55201 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BRPF1P55201 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BRPF1P55201 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
BRPF1P55201 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC17.83■□□□□ 0.44
BRPF1P55201 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC17.83■□□□□ 0.44
BRPF1P55201 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC17.83■□□□□ 0.44
BRPF1P55201 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms