Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 COX11-210ENST00000639671 696 ntBASIC12.44□□□□□ -0.42
CX3CR1P49238 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.44□□□□□ -0.42
CX3CR1P49238 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.44□□□□□ -0.42
CX3CR1P49238 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
CX3CR1P49238 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CX3CR1P49238 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CX3CR1P49238 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
CX3CR1P49238 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
CX3CR1P49238 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CX3CR1P49238 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.44□□□□□ -0.42
CX3CR1P49238 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CX3CR1P49238 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CX3CR1P49238 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
CX3CR1P49238 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CX3CR1P49238 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC12.44□□□□□ -0.42
CX3CR1P49238 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.44□□□□□ -0.42
CX3CR1P49238 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.44□□□□□ -0.42
CX3CR1P49238 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CX3CR1P49238 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.44□□□□□ -0.42
CX3CR1P49238 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
CX3CR1P49238 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
CX3CR1P49238 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CX3CR1P49238 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CX3CR1P49238 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CX3CR1P49238 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.43□□□□□ -0.42
CX3CR1P49238 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.43□□□□□ -0.42
CX3CR1P49238 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
CX3CR1P49238 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CX3CR1P49238 LINC00115-201ENST00000473798 1317 ntBASIC12.43□□□□□ -0.42
CX3CR1P49238 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.43□□□□□ -0.42
CX3CR1P49238 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CX3CR1P49238 MARK2P9-201ENST00000430958 1727 ntBASIC12.43□□□□□ -0.42
CX3CR1P49238 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
CX3CR1P49238 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.43□□□□□ -0.42
CX3CR1P49238 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CX3CR1P49238 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CX3CR1P49238 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.43□□□□□ -0.42
CX3CR1P49238 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CX3CR1P49238 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
CX3CR1P49238 RCC2P1-201ENST00000452257 1476 ntBASIC12.43□□□□□ -0.42
CX3CR1P49238 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
CX3CR1P49238 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CX3CR1P49238 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CX3CR1P49238 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC12.43□□□□□ -0.42
CX3CR1P49238 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CX3CR1P49238 AL391647.1-201ENST00000395664 511 ntBASIC12.43□□□□□ -0.42
CX3CR1P49238 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CX3CR1P49238 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.43□□□□□ -0.42
CX3CR1P49238 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC12.43□□□□□ -0.42
CX3CR1P49238 XBP1P1-201ENST00000436573 652 ntBASIC12.43□□□□□ -0.42
CX3CR1P49238 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC12.43□□□□□ -0.42
CX3CR1P49238 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CX3CR1P49238 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CX3CR1P49238 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.43□□□□□ -0.42
CX3CR1P49238 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.43□□□□□ -0.42
CX3CR1P49238 RPSAP36-202ENST00000494591 1261 ntBASIC12.43□□□□□ -0.42
CX3CR1P49238 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CX3CR1P49238 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CX3CR1P49238 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC12.43□□□□□ -0.42
CX3CR1P49238 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.43□□□□□ -0.42
CX3CR1P49238 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.43□□□□□ -0.42
CX3CR1P49238 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CX3CR1P49238 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CX3CR1P49238 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.43□□□□□ -0.42
CX3CR1P49238 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC12.43□□□□□ -0.42
CX3CR1P49238 AC017083.2-201ENST00000608069 979 ntBASIC12.43□□□□□ -0.42
CX3CR1P49238 AL023803.2-201ENST00000620080 638 ntBASIC12.43□□□□□ -0.42
CX3CR1P49238 CR392039.2-201ENST00000623182 509 ntBASIC12.43□□□□□ -0.42
CX3CR1P49238 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CX3CR1P49238 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CX3CR1P49238 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.43□□□□□ -0.42
CX3CR1P49238 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
CX3CR1P49238 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.43□□□□□ -0.42
CX3CR1P49238 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CX3CR1P49238 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CX3CR1P49238 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CX3CR1P49238 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CX3CR1P49238 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CX3CR1P49238 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CX3CR1P49238 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.43□□□□□ -0.42
CX3CR1P49238 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.43□□□□□ -0.42
CX3CR1P49238 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CX3CR1P49238 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CX3CR1P49238 AP002353.1-201ENST00000528257 1599 ntBASIC12.43□□□□□ -0.42
CX3CR1P49238 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CX3CR1P49238 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.43□□□□□ -0.42
CX3CR1P49238 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CX3CR1P49238 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CX3CR1P49238 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.43□□□□□ -0.42
CX3CR1P49238 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
CX3CR1P49238 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
CX3CR1P49238 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CX3CR1P49238 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CX3CR1P49238 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CX3CR1P49238 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.42□□□□□ -0.42
CX3CR1P49238 Z82170.1-201ENST00000625081 3192 ntBASIC12.42□□□□□ -0.42
CX3CR1P49238 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CX3CR1P49238 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.42□□□□□ -0.42
CX3CR1P49238 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CX3CR1P49238 BEND3P3-201ENST00000611030 2440 ntBASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms