Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.47■□□□□ 0.23
NEDD4P46934 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NEDD4P46934 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NEDD4P46934 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC16.46■□□□□ 0.23
NEDD4P46934 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NEDD4P46934 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NEDD4P46934 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NEDD4P46934 HLA-DMA-203ENST00000395305 777 ntBASIC16.46■□□□□ 0.23
NEDD4P46934 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NEDD4P46934 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NEDD4P46934 CELP-201ENST00000411440 1249 ntTSL 5 BASIC16.46■□□□□ 0.23
NEDD4P46934 AC069218.1-201ENST00000435269 762 ntBASIC16.46■□□□□ 0.23
NEDD4P46934 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC16.46■□□□□ 0.23
NEDD4P46934 MAGEA5-201ENST00000446757 942 ntBASIC16.46■□□□□ 0.23
NEDD4P46934 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC16.46■□□□□ 0.23
NEDD4P46934 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.46■□□□□ 0.23
NEDD4P46934 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC16.46■□□□□ 0.23
NEDD4P46934 OR5BD1P-201ENST00000532527 817 ntBASIC16.46■□□□□ 0.23
NEDD4P46934 KRT8P2-201ENST00000556193 944 ntBASIC16.46■□□□□ 0.23
NEDD4P46934 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.46■□□□□ 0.23
NEDD4P46934 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NEDD4P46934 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC16.46■□□□□ 0.23
NEDD4P46934 AC005041.3-201ENST00000606287 649 ntBASIC16.46■□□□□ 0.23
NEDD4P46934 AC005618.3-201ENST00000624928 458 ntBASIC16.46■□□□□ 0.23
NEDD4P46934 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NEDD4P46934 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NEDD4P46934 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC16.46■□□□□ 0.23
NEDD4P46934 AC006480.2-201ENST00000609770 1337 ntBASIC16.46■□□□□ 0.23
NEDD4P46934 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NEDD4P46934 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
NEDD4P46934 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NEDD4P46934 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
NEDD4P46934 LINC00638-201ENST00000555578 2518 ntBASIC16.46■□□□□ 0.23
NEDD4P46934 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC16.46■□□□□ 0.23
NEDD4P46934 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
NEDD4P46934 AC025183.3-201ENST00000623526 1482 ntBASIC16.46■□□□□ 0.23
NEDD4P46934 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
NEDD4P46934 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NEDD4P46934 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NEDD4P46934 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC16.46■□□□□ 0.23
NEDD4P46934 NRADDP-202ENST00000641269 1585 ntBASIC16.46■□□□□ 0.23
NEDD4P46934 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
NEDD4P46934 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NEDD4P46934 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC16.46■□□□□ 0.23
NEDD4P46934 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NEDD4P46934 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC16.46■□□□□ 0.23
NEDD4P46934 CNTNAP3P2-201ENST00000617175 3861 ntBASIC16.46■□□□□ 0.23
NEDD4P46934 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC16.46■□□□□ 0.23
NEDD4P46934 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NEDD4P46934 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
NEDD4P46934 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
NEDD4P46934 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NEDD4P46934 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NEDD4P46934 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEDD4P46934 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
NEDD4P46934 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
NEDD4P46934 SNORA50C-201ENST00000408535 133 ntBASIC16.45■□□□□ 0.22
NEDD4P46934 RN7SKP109-201ENST00000410592 316 ntBASIC16.45■□□□□ 0.22
NEDD4P46934 NOC2LP1-201ENST00000450578 752 ntBASIC16.45■□□□□ 0.22
NEDD4P46934 GRPEL2P1-201ENST00000453145 339 ntBASIC16.45■□□□□ 0.22
NEDD4P46934 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.45■□□□□ 0.22
NEDD4P46934 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC16.45■□□□□ 0.22
NEDD4P46934 JPT2-214ENST00000569765 782 ntTSL 2 BASIC16.45■□□□□ 0.22
NEDD4P46934 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC16.45■□□□□ 0.22
NEDD4P46934 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC16.45■□□□□ 0.22
NEDD4P46934 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.45■□□□□ 0.22
NEDD4P46934 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
NEDD4P46934 SNORA50.1-201ENST00000628590 135 ntBASIC16.45■□□□□ 0.22
NEDD4P46934 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEDD4P46934 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NEDD4P46934 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEDD4P46934 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEDD4P46934 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEDD4P46934 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEDD4P46934 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEDD4P46934 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NEDD4P46934 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEDD4P46934 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEDD4P46934 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC16.45■□□□□ 0.22
NEDD4P46934 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NEDD4P46934 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEDD4P46934 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEDD4P46934 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEDD4P46934 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEDD4P46934 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC16.45■□□□□ 0.22
NEDD4P46934 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEDD4P46934 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
NEDD4P46934 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC16.45■□□□□ 0.22
NEDD4P46934 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEDD4P46934 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NEDD4P46934 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.45■□□□□ 0.22
NEDD4P46934 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
NEDD4P46934 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NEDD4P46934 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEDD4P46934 OR2I1P-209ENST00000641730 5365 ntBASIC16.45■□□□□ 0.22
NEDD4P46934 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEDD4P46934 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NEDD4P46934 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEDD4P46934 MIR33B-201ENST00000385104 96 ntBASIC16.45■□□□□ 0.22
NEDD4P46934 FTLP1-201ENST00000449155 526 ntBASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms