Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
MTHFRP42898 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MTHFRP42898 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
MTHFRP42898 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
MTHFRP42898 MYADML-201ENST00000474610 2147 ntBASIC14.69□□□□□ -0.06
MTHFRP42898 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.69□□□□□ -0.06
MTHFRP42898 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MTHFRP42898 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
MTHFRP42898 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.69□□□□□ -0.06
MTHFRP42898 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
MTHFRP42898 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
MTHFRP42898 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
MTHFRP42898 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
MTHFRP42898 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MTHFRP42898 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MTHFRP42898 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
MTHFRP42898 GEMIN8P4-201ENST00000380526 729 ntBASIC14.69□□□□□ -0.06
MTHFRP42898 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC14.69□□□□□ -0.06
MTHFRP42898 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC14.69□□□□□ -0.06
MTHFRP42898 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC14.69□□□□□ -0.06
MTHFRP42898 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC14.69□□□□□ -0.06
MTHFRP42898 AC023906.1-201ENST00000486386 453 ntBASIC14.69□□□□□ -0.06
MTHFRP42898 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC14.69□□□□□ -0.06
MTHFRP42898 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC14.69□□□□□ -0.06
MTHFRP42898 HNRNPA1P5-201ENST00000558213 966 ntBASIC14.69□□□□□ -0.06
MTHFRP42898 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
MTHFRP42898 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC14.69□□□□□ -0.06
MTHFRP42898 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC14.69□□□□□ -0.06
MTHFRP42898 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC14.69□□□□□ -0.06
MTHFRP42898 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MTHFRP42898 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MTHFRP42898 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
MTHFRP42898 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MTHFRP42898 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
MTHFRP42898 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
MTHFRP42898 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
MTHFRP42898 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MTHFRP42898 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
MTHFRP42898 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC14.69□□□□□ -0.06
MTHFRP42898 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
MTHFRP42898 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MTHFRP42898 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MTHFRP42898 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MTHFRP42898 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
MTHFRP42898 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
MTHFRP42898 AC018442.1-201ENST00000421439 2061 ntBASIC14.69□□□□□ -0.06
MTHFRP42898 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
MTHFRP42898 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MTHFRP42898 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.68□□□□□ -0.06
MTHFRP42898 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MTHFRP42898 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.68□□□□□ -0.06
MTHFRP42898 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC14.68□□□□□ -0.06
MTHFRP42898 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.68□□□□□ -0.06
MTHFRP42898 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MTHFRP42898 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC14.68□□□□□ -0.06
MTHFRP42898 AC138761.6-201ENST00000583997 1423 ntBASIC14.68□□□□□ -0.06
MTHFRP42898 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
MTHFRP42898 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MTHFRP42898 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
MTHFRP42898 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
MTHFRP42898 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MTHFRP42898 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.68□□□□□ -0.06
MTHFRP42898 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
MTHFRP42898 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MTHFRP42898 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
MTHFRP42898 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MTHFRP42898 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
MTHFRP42898 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
MTHFRP42898 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MTHFRP42898 AC073210.1-201ENST00000414799 232 ntBASIC14.68□□□□□ -0.06
MTHFRP42898 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
MTHFRP42898 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC14.68□□□□□ -0.06
MTHFRP42898 STK24P1-201ENST00000455035 1291 ntBASIC14.68□□□□□ -0.06
MTHFRP42898 AL512310.5-201ENST00000551999 515 ntBASIC14.68□□□□□ -0.06
MTHFRP42898 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
MTHFRP42898 RN7SL455P-201ENST00000580629 282 ntBASIC14.68□□□□□ -0.06
MTHFRP42898 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC14.68□□□□□ -0.06
MTHFRP42898 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC14.68□□□□□ -0.06
MTHFRP42898 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
MTHFRP42898 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
MTHFRP42898 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
MTHFRP42898 AC041040.2-201ENST00000622926 2899 ntBASIC14.68□□□□□ -0.06
MTHFRP42898 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
MTHFRP42898 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC14.68□□□□□ -0.06
MTHFRP42898 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MTHFRP42898 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MTHFRP42898 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MTHFRP42898 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
MTHFRP42898 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MTHFRP42898 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MTHFRP42898 TBC1D27-202ENST00000424239 1573 ntBASIC14.68□□□□□ -0.06
MTHFRP42898 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MTHFRP42898 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MTHFRP42898 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MTHFRP42898 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.68□□□□□ -0.06
MTHFRP42898 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC14.68□□□□□ -0.06
MTHFRP42898 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.68□□□□□ -0.06
MTHFRP42898 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.68□□□□□ -0.06
MTHFRP42898 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.67□□□□□ -0.06
MTHFRP42898 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms