Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC10.4□□□□□ -0.74
CKS2P33552 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC10.4□□□□□ -0.74
CKS2P33552 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
CKS2P33552 PBX1-203ENST00000420696 6636 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
CKS2P33552 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC10.4□□□□□ -0.74
CKS2P33552 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CKS2P33552 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CKS2P33552 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CKS2P33552 CXorf38-203ENST00000378426 4895 ntTSL 2 BASIC10.4□□□□□ -0.74
CKS2P33552 ZCCHC9-201ENST00000254037 4606 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
CKS2P33552 PCDHGB2-201ENST00000522605 4602 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CKS2P33552 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC10.4□□□□□ -0.74
CKS2P33552 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CKS2P33552 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CKS2P33552 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
CKS2P33552 KLF8-202ENST00000374928 4821 ntTSL 2 BASIC10.4□□□□□ -0.74
CKS2P33552 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CKS2P33552 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC10.4□□□□□ -0.74
CKS2P33552 SLFNL1-202ENST00000359345 4310 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
CKS2P33552 KLHL23-202ENST00000392647 4077 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CKS2P33552 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CKS2P33552 AL139400.1-201ENST00000366220 510 ntBASIC10.4□□□□□ -0.74
CKS2P33552 RPF1-202ENST00000370656 724 ntTSL 2 BASIC10.4□□□□□ -0.74
CKS2P33552 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
CKS2P33552 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
CKS2P33552 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
CKS2P33552 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC10.4□□□□□ -0.74
CKS2P33552 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC10.4□□□□□ -0.74
CKS2P33552 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CKS2P33552 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC10.4□□□□□ -0.74
CKS2P33552 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC10.4□□□□□ -0.74
CKS2P33552 HLA-J-203ENST00000494367 1087 ntBASIC10.4□□□□□ -0.74
CKS2P33552 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC10.4□□□□□ -0.74
CKS2P33552 LY6E-204ENST00000519546 971 ntTSL 2 BASIC10.4□□□□□ -0.74
CKS2P33552 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC10.4□□□□□ -0.74
CKS2P33552 AC069262.1-201ENST00000539058 672 ntBASIC10.4□□□□□ -0.74
CKS2P33552 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CKS2P33552 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
CKS2P33552 RARRES2P5-201ENST00000564013 466 ntBASIC10.4□□□□□ -0.74
CKS2P33552 AC004466.1-201ENST00000599515 1080 ntBASIC10.4□□□□□ -0.74
CKS2P33552 AC120114.3-201ENST00000611923 658 ntBASIC10.4□□□□□ -0.74
CKS2P33552 AL662799.1-202ENST00000614205 422 ntBASIC10.4□□□□□ -0.74
CKS2P33552 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
CKS2P33552 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
CKS2P33552 PXMP4-203ENST00000409299 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CKS2P33552 STX3-207ENST00000633708 3111 ntTSL 5 BASIC10.4□□□□□ -0.74
CKS2P33552 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
CKS2P33552 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
CKS2P33552 AC092028.1-202ENST00000641483 3547 ntBASIC10.4□□□□□ -0.74
CKS2P33552 AC092028.1-201ENST00000641781 3540 ntBASIC10.4□□□□□ -0.74
CKS2P33552 PRKG2-201ENST00000264399 4822 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
CKS2P33552 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
CKS2P33552 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CKS2P33552 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CKS2P33552 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
CKS2P33552 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
CKS2P33552 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
CKS2P33552 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
CKS2P33552 PCDHAC1-201ENST00000253807 5299 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
CKS2P33552 OS9-203ENST00000389142 2457 ntTSL 5 BASIC10.4□□□□□ -0.75
CKS2P33552 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
CKS2P33552 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CKS2P33552 AC092117.1-201ENST00000621230 3250 ntBASIC10.39□□□□□ -0.75
CKS2P33552 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC10.39□□□□□ -0.75
CKS2P33552 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CKS2P33552 CEP170-204ENST00000366544 6805 ntTSL 5 BASIC10.39□□□□□ -0.75
CKS2P33552 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
CKS2P33552 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CKS2P33552 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CKS2P33552 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC10.39□□□□□ -0.75
CKS2P33552 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC10.39□□□□□ -0.75
CKS2P33552 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
CKS2P33552 DNMT1-202ENST00000359526 5206 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CKS2P33552 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
CKS2P33552 TUBB4AP1-201ENST00000450755 1325 ntBASIC10.39□□□□□ -0.75
CKS2P33552 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
CKS2P33552 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CKS2P33552 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CKS2P33552 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CKS2P33552 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC10.39□□□□□ -0.75
CKS2P33552 PLEKHM1-201ENST00000430334 5263 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CKS2P33552 LAMB3-201ENST00000356082 4055 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CKS2P33552 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CKS2P33552 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CKS2P33552 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC10.39□□□□□ -0.75
CKS2P33552 RIPK4-202ENST00000352483 4016 ntTSL 5 BASIC10.39□□□□□ -0.75
CKS2P33552 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
CKS2P33552 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CKS2P33552 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CKS2P33552 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC10.39□□□□□ -0.75
CKS2P33552 AC134915.1-201ENST00000426461 574 ntBASIC10.39□□□□□ -0.75
CKS2P33552 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC10.39□□□□□ -0.75
CKS2P33552 PNKD-204ENST00000436005 978 ntTSL 5 BASIC10.39□□□□□ -0.75
CKS2P33552 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC10.39□□□□□ -0.75
CKS2P33552 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CKS2P33552 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC10.39□□□□□ -0.75
CKS2P33552 RN7SL399P-201ENST00000471648 279 ntBASIC10.39□□□□□ -0.75
CKS2P33552 ALG3P1-201ENST00000508806 1114 ntBASIC10.39□□□□□ -0.75
CKS2P33552 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC10.39□□□□□ -0.75
CKS2P33552 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC10.39□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms