Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VCLP18206 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC14.26□□□□□ -0.13
VCLP18206 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VCLP18206 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VCLP18206 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VCLP18206 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VCLP18206 CYP4F23P-201ENST00000593402 1579 ntBASIC14.26□□□□□ -0.13
VCLP18206 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
VCLP18206 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
VCLP18206 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VCLP18206 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
VCLP18206 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VCLP18206 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC14.25□□□□□ -0.13
VCLP18206 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VCLP18206 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
VCLP18206 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VCLP18206 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
VCLP18206 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VCLP18206 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VCLP18206 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
VCLP18206 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VCLP18206 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VCLP18206 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VCLP18206 TUBBP5-203ENST00000508529 1334 ntBASIC14.25□□□□□ -0.13
VCLP18206 TUBB8P4-201ENST00000511806 1324 ntBASIC14.25□□□□□ -0.13
VCLP18206 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.25□□□□□ -0.13
VCLP18206 AC018629.1-201ENST00000623381 1736 ntBASIC14.25□□□□□ -0.13
VCLP18206 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.25□□□□□ -0.13
VCLP18206 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VCLP18206 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VCLP18206 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
VCLP18206 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.25□□□□□ -0.13
VCLP18206 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VCLP18206 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.25□□□□□ -0.13
VCLP18206 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.25□□□□□ -0.13
VCLP18206 XBP1P1-201ENST00000436573 652 ntBASIC14.25□□□□□ -0.13
VCLP18206 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.25□□□□□ -0.13
VCLP18206 AC022494.1-201ENST00000466044 728 ntBASIC14.25□□□□□ -0.13
VCLP18206 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VCLP18206 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.25□□□□□ -0.13
VCLP18206 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.25□□□□□ -0.13
VCLP18206 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.25□□□□□ -0.13
VCLP18206 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.25□□□□□ -0.13
VCLP18206 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.25□□□□□ -0.13
VCLP18206 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.25□□□□□ -0.13
VCLP18206 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.25□□□□□ -0.13
VCLP18206 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
VCLP18206 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
VCLP18206 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VCLP18206 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
VCLP18206 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VCLP18206 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
VCLP18206 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VCLP18206 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VCLP18206 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VCLP18206 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VCLP18206 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VCLP18206 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
VCLP18206 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VCLP18206 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VCLP18206 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
VCLP18206 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
VCLP18206 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VCLP18206 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
VCLP18206 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VCLP18206 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
VCLP18206 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
VCLP18206 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.24□□□□□ -0.13
VCLP18206 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
VCLP18206 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VCLP18206 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.24□□□□□ -0.13
VCLP18206 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
VCLP18206 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VCLP18206 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VCLP18206 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
VCLP18206 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VCLP18206 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.24□□□□□ -0.13
VCLP18206 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
VCLP18206 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
VCLP18206 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VCLP18206 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.24□□□□□ -0.13
VCLP18206 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VCLP18206 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VCLP18206 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.24□□□□□ -0.13
VCLP18206 ST13P19-201ENST00000442505 1124 ntBASIC14.24□□□□□ -0.13
VCLP18206 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.24□□□□□ -0.13
VCLP18206 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.24□□□□□ -0.13
VCLP18206 AC005077.2-201ENST00000449786 690 ntBASIC14.24□□□□□ -0.13
VCLP18206 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VCLP18206 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VCLP18206 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.24□□□□□ -0.13
VCLP18206 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.24□□□□□ -0.13
VCLP18206 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.24□□□□□ -0.13
VCLP18206 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.24□□□□□ -0.13
VCLP18206 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VCLP18206 PGAM1P5-201ENST00000548011 764 ntBASIC14.24□□□□□ -0.13
VCLP18206 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.24□□□□□ -0.13
VCLP18206 AC140658.4-201ENST00000561990 352 ntBASIC14.24□□□□□ -0.13
VCLP18206 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VCLP18206 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms