Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC11.34□□□□□ -0.59
ACANP16112 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ACANP16112 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ACANP16112 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ACANP16112 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ACANP16112 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
ACANP16112 NELL2-203ENST00000429094 3612 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ACANP16112 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
ACANP16112 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
ACANP16112 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ACANP16112 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC11.34□□□□□ -0.59
ACANP16112 FAM213AP2-201ENST00000521579 683 ntBASIC11.34□□□□□ -0.59
ACANP16112 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
ACANP16112 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC11.34□□□□□ -0.59
ACANP16112 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
ACANP16112 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
ACANP16112 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC11.34□□□□□ -0.59
ACANP16112 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC11.34□□□□□ -0.59
ACANP16112 CCND3P2-201ENST00000579393 537 ntBASIC11.34□□□□□ -0.59
ACANP16112 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC11.34□□□□□ -0.59
ACANP16112 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
ACANP16112 AC148476.1-201ENST00000622182 705 ntBASIC11.34□□□□□ -0.59
ACANP16112 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
ACANP16112 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC11.34□□□□□ -0.59
ACANP16112 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC11.33□□□□□ -0.59
ACANP16112 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC11.33□□□□□ -0.59
ACANP16112 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC11.33□□□□□ -0.59
ACANP16112 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
ACANP16112 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
ACANP16112 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ACANP16112 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC11.33□□□□□ -0.6
ACANP16112 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC11.33□□□□□ -0.6
ACANP16112 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC11.33□□□□□ -0.6
ACANP16112 PPT1-215ENST00000641471 2368 ntBASIC11.33□□□□□ -0.6
ACANP16112 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ACANP16112 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ACANP16112 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ACANP16112 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ACANP16112 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC11.33□□□□□ -0.6
ACANP16112 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC11.33□□□□□ -0.6
ACANP16112 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC11.33□□□□□ -0.6
ACANP16112 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
ACANP16112 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
ACANP16112 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ACANP16112 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
ACANP16112 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC11.33□□□□□ -0.6
ACANP16112 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC11.33□□□□□ -0.6
ACANP16112 AC006059.1-201ENST00000438017 722 ntTSL 5 BASIC11.33□□□□□ -0.6
ACANP16112 PLAC9P1-203ENST00000440031 223 ntBASIC11.33□□□□□ -0.6
ACANP16112 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC11.33□□□□□ -0.6
ACANP16112 KCNE3-202ENST00000525550 935 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ACANP16112 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
ACANP16112 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
ACANP16112 TIMM23-201ENST00000580018 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ACANP16112 AC015818.3-201ENST00000583797 589 ntBASIC11.33□□□□□ -0.6
ACANP16112 AL031673.1-201ENST00000611460 466 ntBASIC11.33□□□□□ -0.6
ACANP16112 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC11.33□□□□□ -0.6
ACANP16112 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
ACANP16112 SALL4P6-201ENST00000429385 1691 ntBASIC11.33□□□□□ -0.6
ACANP16112 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
ACANP16112 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ACANP16112 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
ACANP16112 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
ACANP16112 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ACANP16112 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC11.33□□□□□ -0.6
ACANP16112 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC11.33□□□□□ -0.6
ACANP16112 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC11.33□□□□□ -0.6
ACANP16112 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
ACANP16112 AC022532.1-201ENST00000624563 1728 ntBASIC11.33□□□□□ -0.6
ACANP16112 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC11.33□□□□□ -0.6
ACANP16112 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC11.33□□□□□ -0.6
ACANP16112 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC11.33□□□□□ -0.6
ACANP16112 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ACANP16112 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ACANP16112 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
ACANP16112 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
ACANP16112 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
ACANP16112 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
ACANP16112 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ACANP16112 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
ACANP16112 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ACANP16112 EIF2B5-202ENST00000432569 984 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ACANP16112 OR52X1P-201ENST00000446117 914 ntBASIC11.33□□□□□ -0.6
ACANP16112 AC009517.1-201ENST00000454750 570 ntBASIC11.33□□□□□ -0.6
ACANP16112 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
ACANP16112 RN7SL202P-201ENST00000584410 262 ntBASIC11.33□□□□□ -0.6
ACANP16112 FAM223B-202ENST00000598177 713 ntBASIC11.33□□□□□ -0.6
ACANP16112 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ACANP16112 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
ACANP16112 BX510359.7-201ENST00000619819 630 ntBASIC11.33□□□□□ -0.6
ACANP16112 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC11.33□□□□□ -0.6
ACANP16112 FAM223A-202ENST00000625204 713 ntBASIC11.33□□□□□ -0.6
ACANP16112 IL4R-219ENST00000628578 201 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ACANP16112 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
ACANP16112 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
ACANP16112 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
ACANP16112 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
ACANP16112 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
ACANP16112 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
ACANP16112 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms