Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TPM1P09493 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
TPM1P09493 CARS-214ENST00000529772 2637 ntTSL 2 BASIC15.6■□□□□ 0.09
TPM1P09493 AL354989.2-201ENST00000435838 1540 ntBASIC15.6■□□□□ 0.09
TPM1P09493 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TPM1P09493 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC15.6■□□□□ 0.09
TPM1P09493 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TPM1P09493 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC15.6■□□□□ 0.09
TPM1P09493 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TPM1P09493 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TPM1P09493 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TPM1P09493 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TPM1P09493 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TPM1P09493 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TPM1P09493 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TPM1P09493 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TPM1P09493 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TPM1P09493 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TPM1P09493 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.6■□□□□ 0.09
TPM1P09493 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TPM1P09493 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.6■□□□□ 0.09
TPM1P09493 UGT1A2P-201ENST00000454886 866 ntBASIC15.6■□□□□ 0.09
TPM1P09493 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.6■□□□□ 0.09
TPM1P09493 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.6■□□□□ 0.09
TPM1P09493 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.6■□□□□ 0.09
TPM1P09493 AC025279.2-201ENST00000569730 653 ntBASIC15.6■□□□□ 0.09
TPM1P09493 PAM16-211ENST00000575848 518 ntTSL 3 BASIC15.6■□□□□ 0.09
TPM1P09493 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TPM1P09493 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TPM1P09493 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC15.6■□□□□ 0.09
TPM1P09493 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TPM1P09493 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TPM1P09493 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TPM1P09493 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TPM1P09493 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC15.6■□□□□ 0.09
TPM1P09493 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
TPM1P09493 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC15.6■□□□□ 0.09
TPM1P09493 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
TPM1P09493 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC15.6■□□□□ 0.09
TPM1P09493 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC15.6■□□□□ 0.09
TPM1P09493 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TPM1P09493 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TPM1P09493 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TPM1P09493 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TPM1P09493 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC15.6■□□□□ 0.09
TPM1P09493 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TPM1P09493 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TPM1P09493 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TPM1P09493 LINC00567-201ENST00000569854 3409 ntBASIC15.59■□□□□ 0.09
TPM1P09493 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC15.59■□□□□ 0.09
TPM1P09493 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TPM1P09493 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TPM1P09493 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TPM1P09493 PHB-210ENST00000511832 1509 ntTSL 2 BASIC15.59■□□□□ 0.09
TPM1P09493 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TPM1P09493 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TPM1P09493 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.59■□□□□ 0.09
TPM1P09493 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TPM1P09493 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC15.59■□□□□ 0.09
TPM1P09493 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TPM1P09493 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TPM1P09493 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TPM1P09493 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TPM1P09493 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TPM1P09493 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TPM1P09493 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
TPM1P09493 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.59■□□□□ 0.09
TPM1P09493 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.59■□□□□ 0.09
TPM1P09493 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TPM1P09493 AC106760.1-201ENST00000508690 800 ntBASIC15.59■□□□□ 0.09
TPM1P09493 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TPM1P09493 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TPM1P09493 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.59■□□□□ 0.09
TPM1P09493 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TPM1P09493 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.59■□□□□ 0.09
TPM1P09493 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.59■□□□□ 0.09
TPM1P09493 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TPM1P09493 RN7SL713P-201ENST00000582127 302 ntBASIC15.59■□□□□ 0.09
TPM1P09493 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.59■□□□□ 0.09
TPM1P09493 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TPM1P09493 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TPM1P09493 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
TPM1P09493 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TPM1P09493 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC15.59■□□□□ 0.09
TPM1P09493 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TPM1P09493 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TPM1P09493 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TPM1P09493 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC15.59■□□□□ 0.09
TPM1P09493 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC15.59■□□□□ 0.09
TPM1P09493 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TPM1P09493 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TPM1P09493 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
TPM1P09493 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TPM1P09493 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TPM1P09493 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TPM1P09493 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
TPM1P09493 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
TPM1P09493 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TPM1P09493 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TPM1P09493 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms