Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CD48P09326 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.58□□□□□ -0.08
CD48P09326 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD48P09326 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.58□□□□□ -0.08
CD48P09326 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC14.58□□□□□ -0.08
CD48P09326 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD48P09326 SNORA50.1-201ENST00000628590 135 ntBASIC14.58□□□□□ -0.08
CD48P09326 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CD48P09326 NAP1L6-202ENST00000641404 1222 ntBASIC14.58□□□□□ -0.08
CD48P09326 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.58□□□□□ -0.08
CD48P09326 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CD48P09326 AC009474.1-201ENST00000455096 1565 ntBASIC14.58□□□□□ -0.08
CD48P09326 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
CD48P09326 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD48P09326 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD48P09326 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD48P09326 TUBBP5-203ENST00000508529 1334 ntBASIC14.58□□□□□ -0.08
CD48P09326 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.58□□□□□ -0.08
CD48P09326 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CD48P09326 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD48P09326 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CD48P09326 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD48P09326 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CD48P09326 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CD48P09326 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD48P09326 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD48P09326 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD48P09326 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD48P09326 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD48P09326 AL157791.1-201ENST00000553667 1699 ntBASIC14.58□□□□□ -0.08
CD48P09326 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CD48P09326 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD48P09326 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD48P09326 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.58□□□□□ -0.08
CD48P09326 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.58□□□□□ -0.08
CD48P09326 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD48P09326 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CD48P09326 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CD48P09326 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC14.57□□□□□ -0.08
CD48P09326 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CD48P09326 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD48P09326 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC14.57□□□□□ -0.08
CD48P09326 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CD48P09326 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC14.57□□□□□ -0.08
CD48P09326 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD48P09326 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD48P09326 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD48P09326 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD48P09326 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD48P09326 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD48P09326 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CD48P09326 KRT17P5-201ENST00000332088 839 ntBASIC14.57□□□□□ -0.08
CD48P09326 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.57□□□□□ -0.08
CD48P09326 AC239868.1-201ENST00000369385 493 ntBASIC14.57□□□□□ -0.08
CD48P09326 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CD48P09326 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.57□□□□□ -0.08
CD48P09326 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.57□□□□□ -0.08
CD48P09326 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.57□□□□□ -0.08
CD48P09326 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD48P09326 AC091804.1-201ENST00000486888 567 ntBASIC14.57□□□□□ -0.08
CD48P09326 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CD48P09326 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CD48P09326 AP001258.2-201ENST00000529891 490 ntBASIC14.57□□□□□ -0.08
CD48P09326 KRT8P1-201ENST00000557533 1207 ntBASIC14.57□□□□□ -0.08
CD48P09326 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.57□□□□□ -0.08
CD48P09326 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.57□□□□□ -0.08
CD48P09326 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.57□□□□□ -0.08
CD48P09326 AL021707.6-201ENST00000609212 491 ntBASIC14.57□□□□□ -0.08
CD48P09326 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.57□□□□□ -0.08
CD48P09326 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD48P09326 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CD48P09326 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CD48P09326 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD48P09326 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD48P09326 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CD48P09326 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
CD48P09326 TSN-212ENST00000536142 3328 ntTSL 2 BASIC14.57□□□□□ -0.08
CD48P09326 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD48P09326 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.57□□□□□ -0.08
CD48P09326 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.57□□□□□ -0.08
CD48P09326 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CD48P09326 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD48P09326 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
CD48P09326 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC14.57□□□□□ -0.08
CD48P09326 AC125807.2-201ENST00000513358 3514 ntBASIC14.57□□□□□ -0.08
CD48P09326 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD48P09326 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CD48P09326 KRT8P43-201ENST00000406052 1458 ntBASIC14.57□□□□□ -0.08
CD48P09326 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.57□□□□□ -0.08
CD48P09326 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.56□□□□□ -0.08
CD48P09326 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CD48P09326 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD48P09326 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.56□□□□□ -0.08
CD48P09326 AC020917.4-201ENST00000623994 1999 ntBASIC14.56□□□□□ -0.08
CD48P09326 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD48P09326 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC14.56□□□□□ -0.08
CD48P09326 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CD48P09326 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CD48P09326 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD48P09326 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms