Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
APOA4P06727 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
APOA4P06727 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOA4P06727 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC14.17□□□□□ -0.14
APOA4P06727 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
APOA4P06727 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
APOA4P06727 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOA4P06727 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOA4P06727 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
APOA4P06727 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOA4P06727 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
APOA4P06727 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.17□□□□□ -0.14
APOA4P06727 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOA4P06727 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
APOA4P06727 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
APOA4P06727 DPM3-202ENST00000368399 517 ntBASIC14.17□□□□□ -0.14
APOA4P06727 AC078875.1-201ENST00000431907 724 ntBASIC14.17□□□□□ -0.14
APOA4P06727 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.17□□□□□ -0.14
APOA4P06727 XBP1P1-201ENST00000436573 652 ntBASIC14.17□□□□□ -0.14
APOA4P06727 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.17□□□□□ -0.14
APOA4P06727 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.17□□□□□ -0.14
APOA4P06727 AC108725.1-201ENST00000495472 409 ntBASIC14.17□□□□□ -0.14
APOA4P06727 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
APOA4P06727 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.17□□□□□ -0.14
APOA4P06727 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
APOA4P06727 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOA4P06727 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOA4P06727 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
APOA4P06727 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOA4P06727 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOA4P06727 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
APOA4P06727 AC024075.2-201ENST00000598112 1473 ntBASIC14.17□□□□□ -0.14
APOA4P06727 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOA4P06727 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
APOA4P06727 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
APOA4P06727 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOA4P06727 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
APOA4P06727 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
APOA4P06727 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.17□□□□□ -0.14
APOA4P06727 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
APOA4P06727 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOA4P06727 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
APOA4P06727 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
APOA4P06727 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
APOA4P06727 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
APOA4P06727 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOA4P06727 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.16□□□□□ -0.14
APOA4P06727 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOA4P06727 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
APOA4P06727 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.16□□□□□ -0.14
APOA4P06727 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOA4P06727 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.16□□□□□ -0.14
APOA4P06727 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOA4P06727 DDC-214ENST00000622873 1839 ntTSL 3 BASIC14.16□□□□□ -0.14
APOA4P06727 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
APOA4P06727 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
APOA4P06727 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
APOA4P06727 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOA4P06727 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOA4P06727 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOA4P06727 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.16□□□□□ -0.14
APOA4P06727 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
APOA4P06727 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.16□□□□□ -0.14
APOA4P06727 HMGA1P1-201ENST00000415560 1062 ntBASIC14.16□□□□□ -0.14
APOA4P06727 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.16□□□□□ -0.14
APOA4P06727 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC14.16□□□□□ -0.14
APOA4P06727 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC14.16□□□□□ -0.14
APOA4P06727 OR2R1P-201ENST00000441404 914 ntBASIC14.16□□□□□ -0.14
APOA4P06727 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOA4P06727 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.16□□□□□ -0.14
APOA4P06727 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.16□□□□□ -0.14
APOA4P06727 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.16□□□□□ -0.14
APOA4P06727 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.16□□□□□ -0.14
APOA4P06727 AL132994.2-201ENST00000603120 687 ntBASIC14.16□□□□□ -0.14
APOA4P06727 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.16□□□□□ -0.14
APOA4P06727 AC092299.1-201ENST00000632679 757 ntBASIC14.16□□□□□ -0.14
APOA4P06727 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOA4P06727 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.16□□□□□ -0.14
APOA4P06727 AL355102.3-201ENST00000554299 1678 ntBASIC14.16□□□□□ -0.14
APOA4P06727 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
APOA4P06727 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
APOA4P06727 AL365181.3-201ENST00000605886 3222 ntBASIC14.16□□□□□ -0.14
APOA4P06727 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
APOA4P06727 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOA4P06727 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
APOA4P06727 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC14.16□□□□□ -0.14
APOA4P06727 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
APOA4P06727 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOA4P06727 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOA4P06727 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.15□□□□□ -0.14
APOA4P06727 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC14.15□□□□□ -0.14
APOA4P06727 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC14.15□□□□□ -0.14
APOA4P06727 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOA4P06727 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.15□□□□□ -0.14
APOA4P06727 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOA4P06727 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.15□□□□□ -0.14
APOA4P06727 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.15□□□□□ -0.14
APOA4P06727 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.15□□□□□ -0.14
APOA4P06727 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
APOA4P06727 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms