Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC12.86□□□□□ -0.35
P04436 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC12.86□□□□□ -0.35
P04436 RN7SL788P-201ENST00000460504 316 ntBASIC12.86□□□□□ -0.35
P04436 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
P04436 RN7SL8P-201ENST00000461771 266 ntBASIC12.86□□□□□ -0.35
P04436 PARP8-218ENST00000513738 596 ntTSL 4 BASIC12.86□□□□□ -0.35
P04436 AP003398.1-201ENST00000531124 318 ntBASIC12.86□□□□□ -0.35
P04436 IQSEC3P1-201ENST00000538799 536 ntBASIC12.86□□□□□ -0.35
P04436 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC12.86□□□□□ -0.35
P04436 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P04436 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
P04436 RN7SL470P-201ENST00000583069 259 ntBASIC12.86□□□□□ -0.35
P04436 AC084781.1-201ENST00000613737 656 ntBASIC12.86□□□□□ -0.35
P04436 BAP1-211ENST00000615113 489 ntBASIC12.86□□□□□ -0.35
P04436 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC12.86□□□□□ -0.35
P04436 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.86□□□□□ -0.35
P04436 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P04436 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P04436 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
P04436 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P04436 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
P04436 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P04436 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
P04436 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P04436 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P04436 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P04436 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
P04436 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC12.86□□□□□ -0.35
P04436 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P04436 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P04436 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P04436 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
P04436 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.86□□□□□ -0.35
P04436 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
P04436 STRCP1-201ENST00000509801 5328 ntBASIC12.86□□□□□ -0.35
P04436 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.86□□□□□ -0.35
P04436 TBC1D27-202ENST00000424239 1573 ntBASIC12.86□□□□□ -0.35
P04436 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.86□□□□□ -0.35
P04436 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P04436 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
P04436 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.85□□□□□ -0.35
P04436 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P04436 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
P04436 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.85□□□□□ -0.35
P04436 CICP16-201ENST00000502609 2813 ntBASIC12.85□□□□□ -0.35
P04436 AC061965.1-201ENST00000560524 1465 ntBASIC12.85□□□□□ -0.35
P04436 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
P04436 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P04436 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
P04436 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
P04436 AC007191.1-201ENST00000623179 2995 ntBASIC12.85□□□□□ -0.35
P04436 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P04436 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P04436 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P04436 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
P04436 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P04436 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
P04436 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
P04436 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
P04436 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P04436 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
P04436 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC12.85□□□□□ -0.35
P04436 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC12.85□□□□□ -0.35
P04436 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
P04436 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC12.85□□□□□ -0.35
P04436 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
P04436 HIST2H2BA-201ENST00000412169 381 ntBASIC12.85□□□□□ -0.35
P04436 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
P04436 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
P04436 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
P04436 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC12.85□□□□□ -0.35
P04436 AL354861.1-201ENST00000445213 355 ntBASIC12.85□□□□□ -0.35
P04436 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC12.85□□□□□ -0.35
P04436 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC12.85□□□□□ -0.35
P04436 RNA5SP417-201ENST00000516459 108 ntBASIC12.85□□□□□ -0.35
P04436 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC12.85□□□□□ -0.35
P04436 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC12.85□□□□□ -0.35
P04436 GAS7-216ENST00000583882 553 ntTSL 5 BASIC12.85□□□□□ -0.35
P04436 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC12.85□□□□□ -0.35
P04436 AC107464.3-201ENST00000609172 737 ntBASIC12.85□□□□□ -0.35
P04436 AL359091.4-201ENST00000610052 409 ntBASIC12.85□□□□□ -0.35
P04436 YRDCP1-201ENST00000621419 643 ntBASIC12.85□□□□□ -0.35
P04436 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC12.85□□□□□ -0.35
P04436 AC011491.1-203ENST00000637688 543 ntBASIC12.85□□□□□ -0.35
P04436 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
P04436 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.85□□□□□ -0.35
P04436 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
P04436 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC12.85□□□□□ -0.35
P04436 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
P04436 OR2I1P-208ENST00000641137 4948 ntBASIC12.85□□□□□ -0.35
P04436 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P04436 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC12.85□□□□□ -0.35
P04436 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P04436 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.85□□□□□ -0.35
P04436 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
P04436 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
P04436 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P04436 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P04436 AC090643.2-201ENST00000623442 2029 ntBASIC12.84□□□□□ -0.35
P04436 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms