Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 ARHGAP27-212ENST00000532038 3694 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
APOC3P02656 ARHGAP27-202ENST00000376922 3628 ntTSL 2 BASIC11.22□□□□□ -0.61
APOC3P02656 DUSP16-201ENST00000228862 3402 ntTSL 5 BASIC11.22□□□□□ -0.61
APOC3P02656 LRTM2-202ENST00000535041 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
APOC3P02656 ROBO4-208ENST00000533054 3071 ntTSL 2 BASIC11.22□□□□□ -0.61
APOC3P02656 C14orf159-203ENST00000412671 2591 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
APOC3P02656 CDRT4-204ENST00000619038 2498 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
APOC3P02656 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
APOC3P02656 CYP1A1-209ENST00000612821 2402 ntTSL 5 BASIC11.21□□□□□ -0.61
APOC3P02656 GEMIN4-207ENST00000576778 4729 ntBASIC11.21□□□□□ -0.61
APOC3P02656 RIN2-201ENST00000255006 4505 ntAPPRIS P2 TSL 2 BASIC11.21□□□□□ -0.61
APOC3P02656 KLF6-207ENST00000542957 4537 ntTSL 5 BASIC11.21□□□□□ -0.61
APOC3P02656 ECM1-202ENST00000369047 2070 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
APOC3P02656 ZKSCAN1-202ENST00000426572 2011 ntTSL 2 BASIC11.21□□□□□ -0.61
APOC3P02656 MXRA5Y-201ENST00000420610 8000 ntBASIC11.21□□□□□ -0.61
APOC3P02656 GOLGA6L2-202ENST00000345070 1972 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
APOC3P02656 CDK5RAP3-202ENST00000536708 1975 ntTSL 2 BASIC11.21□□□□□ -0.61
APOC3P02656 DLC1-210ENST00000512044 3758 ntTSL 2 BASIC11.21□□□□□ -0.61
APOC3P02656 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
APOC3P02656 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
APOC3P02656 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
APOC3P02656 AC011899.1-201ENST00000436489 3600 ntTSL 2 BASIC11.21□□□□□ -0.61
APOC3P02656 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
APOC3P02656 HGNC:18790-209ENST00000513555 3291 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
APOC3P02656 HACD3-201ENST00000261875 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
APOC3P02656 TTC39B-202ENST00000380850 3221 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
APOC3P02656 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
APOC3P02656 ANKRD17-202ENST00000358602 10784 ntAPPRIS P4 TSL 5 BASIC11.21□□□□□ -0.61
APOC3P02656 LINC01471-201ENST00000461398 3079 ntTSL 5 BASIC11.21□□□□□ -0.61
APOC3P02656 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
APOC3P02656 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
APOC3P02656 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC11.21□□□□□ -0.61
APOC3P02656 LRRC32-203ENST00000407242 4311 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
APOC3P02656 NBPF1-204ENST00000432949 4176 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
APOC3P02656 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
APOC3P02656 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
APOC3P02656 SEPT9-205ENST00000427674 3937 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
APOC3P02656 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
APOC3P02656 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC11.21□□□□□ -0.61
APOC3P02656 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
APOC3P02656 PPIH-202ENST00000372549 327 ntTSL 3 BASIC11.21□□□□□ -0.61
APOC3P02656 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
APOC3P02656 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
APOC3P02656 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
APOC3P02656 HLA-H-201ENST00000383620 1096 ntBASIC11.21□□□□□ -0.61
APOC3P02656 NUS1P2-201ENST00000417358 873 ntBASIC11.21□□□□□ -0.61
APOC3P02656 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC11.21□□□□□ -0.61
APOC3P02656 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
APOC3P02656 RPL28-209ENST00000560055 670 ntTSL 3 BASIC11.21□□□□□ -0.61
APOC3P02656 AC074051.2-201ENST00000565115 352 ntBASIC11.21□□□□□ -0.61
APOC3P02656 PHKB-208ENST00000566044 3829 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
APOC3P02656 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC11.21□□□□□ -0.61
APOC3P02656 AL138918.1-201ENST00000568306 659 ntBASIC11.21□□□□□ -0.61
APOC3P02656 PAM16-208ENST00000573553 722 ntTSL 2 BASIC11.21□□□□□ -0.61
APOC3P02656 AL592490.1-201ENST00000409186 6347 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
APOC3P02656 INPP5D-204ENST00000445964 4845 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
APOC3P02656 MAMLD1-201ENST00000262858 4607 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.62
APOC3P02656 AC007608.4-201ENST00000623140 3365 ntBASIC11.21□□□□□ -0.62
APOC3P02656 CNOT4-203ENST00000361528 2215 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
APOC3P02656 ABCF2-201ENST00000222388 2185 ntTSL 5 BASIC11.21□□□□□ -0.62
APOC3P02656 TMEM169-202ENST00000406027 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
APOC3P02656 RAPGEF3-202ENST00000395358 4092 ntTSL 2 BASIC11.21□□□□□ -0.62
APOC3P02656 YLPM1-201ENST00000325680 7108 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
APOC3P02656 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
APOC3P02656 ZNF549-201ENST00000240719 3969 ntAPPRIS P3 TSL 2 BASIC11.21□□□□□ -0.62
APOC3P02656 SORBS2-203ENST00000319471 2824 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
APOC3P02656 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
APOC3P02656 COIL-201ENST00000240316 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
APOC3P02656 PTGFR-202ENST00000370757 4379 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
APOC3P02656 CBFA2T2-205ENST00000375279 7617 ntTSL 5 BASIC11.21□□□□□ -0.62
APOC3P02656 ITPRIP-202ENST00000337478 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
APOC3P02656 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
APOC3P02656 WDR24-202ENST00000293883 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
APOC3P02656 LANCL1-207ENST00000450366 4602 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
APOC3P02656 CNTROB-201ENST00000380262 3769 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
APOC3P02656 SCRN1-207ENST00000434476 1454 ntTSL 2 BASIC11.2□□□□□ -0.62
APOC3P02656 MCCC2-201ENST00000340941 3665 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
APOC3P02656 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC11.2□□□□□ -0.62
APOC3P02656 ATP6AP1-210ENST00000619046 2823 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
APOC3P02656 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC11.2□□□□□ -0.62
APOC3P02656 MCPH1-207ENST00000522905 2049 ntTSL 2 BASIC11.2□□□□□ -0.62
APOC3P02656 AC135012.1-201ENST00000563931 7430 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
APOC3P02656 POLL-201ENST00000299206 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
APOC3P02656 MRO-203ENST00000428869 1966 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
APOC3P02656 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
APOC3P02656 SLC22A12-204ENST00000377574 3206 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
APOC3P02656 CHTF8-201ENST00000306585 2561 ntBASIC11.2□□□□□ -0.62
APOC3P02656 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
APOC3P02656 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
APOC3P02656 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
APOC3P02656 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC11.2□□□□□ -0.62
APOC3P02656 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
APOC3P02656 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC11.2□□□□□ -0.62
APOC3P02656 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
APOC3P02656 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC11.2□□□□□ -0.62
APOC3P02656 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC11.2□□□□□ -0.62
APOC3P02656 GLI3-203ENST00000437480 451 ntTSL 2 BASIC11.2□□□□□ -0.62
APOC3P02656 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC11.2□□□□□ -0.62
APOC3P02656 BX664615.1-201ENST00000443558 458 ntBASIC11.2□□□□□ -0.62
APOC3P02656 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms