Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
O00370 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
O00370 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC15.03■□□□□ -0
O00370 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
O00370 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.03■□□□□ -0
O00370 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
O00370 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
O00370 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
O00370 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.02■□□□□ -0
O00370 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
O00370 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
O00370 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
O00370 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
O00370 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
O00370 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC15.02■□□□□ -0
O00370 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC15.02■□□□□ -0
O00370 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC15.02■□□□□ -0
O00370 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
O00370 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
O00370 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
O00370 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC15.02■□□□□ -0
O00370 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC15.02■□□□□ -0
O00370 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
O00370 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
O00370 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
O00370 AK2P2-201ENST00000439142 405 ntBASIC15.02■□□□□ -0
O00370 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.02■□□□□ -0
O00370 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC15.02■□□□□ -0
O00370 RPSAP15-201ENST00000448168 861 ntBASIC15.02■□□□□ -0
O00370 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC15.02■□□□□ -0
O00370 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.02■□□□□ -0
O00370 NUP210P1-202ENST00000504322 710 ntBASIC15.02■□□□□ -0
O00370 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.02■□□□□ -0
O00370 AC005740.1-201ENST00000515639 522 ntBASIC15.02■□□□□ -0
O00370 ALG1L13P-202ENST00000519320 584 ntBASIC15.02■□□□□ -0
O00370 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC15.02■□□□□ -0
O00370 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
O00370 RN7SL455P-201ENST00000580629 282 ntBASIC15.02■□□□□ -0
O00370 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC15.02■□□□□ -0
O00370 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
O00370 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.02■□□□□ -0
O00370 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.02■□□□□ -0
O00370 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
O00370 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
O00370 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
O00370 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
O00370 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
O00370 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
O00370 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
O00370 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
O00370 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
O00370 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
O00370 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
O00370 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
O00370 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
O00370 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC15.01□□□□□ -0.01
O00370 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
O00370 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
O00370 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
O00370 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
O00370 STK25-235ENST00000543554 2556 ntTSL 2 BASIC15.01□□□□□ -0.01
O00370 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
O00370 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
O00370 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
O00370 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
O00370 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
O00370 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
O00370 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
O00370 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
O00370 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
O00370 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC15.01□□□□□ -0.01
O00370 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC15.01□□□□□ -0.01
O00370 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC15.01□□□□□ -0.01
O00370 NAGK-204ENST00000443872 878 ntTSL 3 BASIC15.01□□□□□ -0.01
O00370 AL353637.1-201ENST00000451571 732 ntBASIC15.01□□□□□ -0.01
O00370 RN7SL258P-201ENST00000478664 300 ntBASIC15.01□□□□□ -0.01
O00370 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
O00370 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.01□□□□□ -0.01
O00370 AC242376.1-201ENST00000559033 726 ntBASIC15.01□□□□□ -0.01
O00370 CMC2-204ENST00000562713 573 ntTSL 3 BASIC15.01□□□□□ -0.01
O00370 STUB1-204ENST00000564370 875 ntTSL 2 BASIC15.01□□□□□ -0.01
O00370 CMC2-209ENST00000565108 399 ntTSL 2 BASIC15.01□□□□□ -0.01
O00370 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC15.01□□□□□ -0.01
O00370 AL353770.1-201ENST00000614915 403 ntBASIC15.01□□□□□ -0.01
O00370 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
O00370 NCLP1-201ENST00000445357 1963 ntBASIC15.01□□□□□ -0.01
O00370 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
O00370 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
O00370 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC15.01□□□□□ -0.01
O00370 AL139158.3-201ENST00000641212 1562 ntBASIC15.01□□□□□ -0.01
O00370 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
O00370 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
O00370 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
O00370 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
O00370 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
O00370 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
O00370 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC15.01□□□□□ -0.01
O00370 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
O00370 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
O00370 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms