Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 CD164-210ENST00000512821 964 ntTSL 2 BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 CFL1-206ENST00000527344 962 ntTSL 2 BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 POLD4-208ENST00000532830 904 ntTSL 3 BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 SKA2-205ENST00000580541 689 ntTSL 3 BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC12.87□□□□□ -0.35
NPIPA3F8WFD2 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 AL022313.4-201ENST00000562756 2046 ntBASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC12.86□□□□□ -0.35
NPIPA3F8WFD2 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms