Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 AC090643.2-201ENST00000623442 2029 ntBASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 CICP16-201ENST00000502609 2813 ntBASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 RPS2P32-201ENST00000439199 892 ntBASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 AL591846.1-201ENST00000451736 433 ntBASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 AC106794.1-201ENST00000506935 792 ntBASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 AC022217.1-201ENST00000521069 738 ntBASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 FAM8A2P-201ENST00000528813 1142 ntBASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 AC003686.1-201ENST00000550956 1034 ntBASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 AC140658.4-201ENST00000561990 352 ntBASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 AC104982.3-201ENST00000581995 514 ntBASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 BNIP3P13-201ENST00000599968 566 ntBASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 AL136295.7-201ENST00000619226 1200 ntBASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 SON-203ENST00000381679 7860 ntTSL 5 BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 CYP4F23P-201ENST00000593402 1579 ntBASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC10.69□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms