Protein–RNA interactions for Protein: Q96L94

SNX22, Sorting nexin-22, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22Q96L94 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNX22Q96L94 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNX22Q96L94 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNX22Q96L94 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNX22Q96L94 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SNX22Q96L94 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
SNX22Q96L94 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
SNX22Q96L94 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
SNX22Q96L94 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC11.99□□□□□ -0.49
SNX22Q96L94 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SNX22Q96L94 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC11.99□□□□□ -0.49
SNX22Q96L94 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC11.99□□□□□ -0.49
SNX22Q96L94 HMGA1P1-201ENST00000415560 1062 ntBASIC11.99□□□□□ -0.49
SNX22Q96L94 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC11.99□□□□□ -0.49
SNX22Q96L94 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC11.99□□□□□ -0.49
SNX22Q96L94 AC106794.1-201ENST00000506935 792 ntBASIC11.99□□□□□ -0.49
SNX22Q96L94 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC11.99□□□□□ -0.49
SNX22Q96L94 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNX22Q96L94 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC11.99□□□□□ -0.49
SNX22Q96L94 DERL2-202ENST00000570848 657 ntTSL 5 BASIC11.99□□□□□ -0.49
SNX22Q96L94 ARL16-210ENST00000574938 751 ntTSL 2 BASIC11.99□□□□□ -0.49
SNX22Q96L94 AC091271.1-201ENST00000611877 1162 ntBASIC11.99□□□□□ -0.49
SNX22Q96L94 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SNX22Q96L94 AC005695.3-201ENST00000614522 232 ntBASIC11.99□□□□□ -0.49
SNX22Q96L94 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SNX22Q96L94 AC022748.3-201ENST00000621828 275 ntBASIC11.99□□□□□ -0.49
SNX22Q96L94 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNX22Q96L94 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNX22Q96L94 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SNX22Q96L94 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNX22Q96L94 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNX22Q96L94 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNX22Q96L94 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SNX22Q96L94 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC11.99□□□□□ -0.49
SNX22Q96L94 AC018629.1-201ENST00000623381 1736 ntBASIC11.99□□□□□ -0.49
SNX22Q96L94 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
SNX22Q96L94 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
SNX22Q96L94 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SNX22Q96L94 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNX22Q96L94 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC11.99□□□□□ -0.49
SNX22Q96L94 AMT-221ENST00000538581 2038 ntTSL 2 BASIC11.99□□□□□ -0.49
SNX22Q96L94 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNX22Q96L94 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNX22Q96L94 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNX22Q96L94 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNX22Q96L94 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SNX22Q96L94 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC11.99□□□□□ -0.49
SNX22Q96L94 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNX22Q96L94 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC11.99□□□□□ -0.49
SNX22Q96L94 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC11.99□□□□□ -0.49
SNX22Q96L94 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNX22Q96L94 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNX22Q96L94 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNX22Q96L94 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
SNX22Q96L94 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC11.98□□□□□ -0.49
SNX22Q96L94 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
SNX22Q96L94 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC11.98□□□□□ -0.49
SNX22Q96L94 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SNX22Q96L94 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
SNX22Q96L94 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SNX22Q96L94 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SNX22Q96L94 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SNX22Q96L94 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SNX22Q96L94 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC11.98□□□□□ -0.49
SNX22Q96L94 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
SNX22Q96L94 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SNX22Q96L94 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC11.98□□□□□ -0.49
SNX22Q96L94 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
SNX22Q96L94 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC11.98□□□□□ -0.49
SNX22Q96L94 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SNX22Q96L94 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
SNX22Q96L94 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SNX22Q96L94 MIR193BHG-211ENST00000641433 5365 ntBASIC11.98□□□□□ -0.49
SNX22Q96L94 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SNX22Q96L94 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC11.98□□□□□ -0.49
SNX22Q96L94 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC11.98□□□□□ -0.49
SNX22Q96L94 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SNX22Q96L94 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC11.98□□□□□ -0.49
SNX22Q96L94 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SNX22Q96L94 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SNX22Q96L94 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
SNX22Q96L94 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SNX22Q96L94 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SNX22Q96L94 AL590824.1-201ENST00000403828 1349 ntBASIC11.98□□□□□ -0.49
SNX22Q96L94 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SNX22Q96L94 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
SNX22Q96L94 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SNX22Q96L94 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SNX22Q96L94 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
SNX22Q96L94 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC11.98□□□□□ -0.49
SNX22Q96L94 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
SNX22Q96L94 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC11.98□□□□□ -0.49
SNX22Q96L94 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SNX22Q96L94 RPS2P32-201ENST00000439199 892 ntBASIC11.98□□□□□ -0.49
SNX22Q96L94 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC11.98□□□□□ -0.49
SNX22Q96L94 OR2R1P-201ENST00000441404 914 ntBASIC11.98□□□□□ -0.49
SNX22Q96L94 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
SNX22Q96L94 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC11.98□□□□□ -0.49
SNX22Q96L94 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC11.98□□□□□ -0.49
SNX22Q96L94 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms