Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCER1Q8TC90 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCER1Q8TC90 OR2R1P-201ENST00000441404 914 ntBASIC21.1■□□□□ 0.97
CCER1Q8TC90 AC012441.2-201ENST00000444843 739 ntBASIC21.1■□□□□ 0.97
CCER1Q8TC90 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCER1Q8TC90 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCER1Q8TC90 HNRNPA1P36-201ENST00000521313 955 ntBASIC21.1■□□□□ 0.97
CCER1Q8TC90 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC21.1■□□□□ 0.97
CCER1Q8TC90 AC140658.4-201ENST00000561990 352 ntBASIC21.1■□□□□ 0.97
CCER1Q8TC90 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCER1Q8TC90 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC21.1■□□□□ 0.97
CCER1Q8TC90 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC21.1■□□□□ 0.97
CCER1Q8TC90 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCER1Q8TC90 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCER1Q8TC90 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCER1Q8TC90 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CCER1Q8TC90 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CCER1Q8TC90 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCER1Q8TC90 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCER1Q8TC90 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCER1Q8TC90 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCER1Q8TC90 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCER1Q8TC90 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCER1Q8TC90 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CCER1Q8TC90 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC21.09■□□□□ 0.97
CCER1Q8TC90 MXI1-205ENST00000393134 889 ntTSL 2 BASIC21.09■□□□□ 0.97
CCER1Q8TC90 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC21.09■□□□□ 0.97
CCER1Q8TC90 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CCER1Q8TC90 AC092580.1-201ENST00000433998 658 ntBASIC21.09■□□□□ 0.97
CCER1Q8TC90 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC21.09■□□□□ 0.97
CCER1Q8TC90 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC21.09■□□□□ 0.97
CCER1Q8TC90 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC21.09■□□□□ 0.97
CCER1Q8TC90 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC21.09■□□□□ 0.97
CCER1Q8TC90 ORC6-206ENST00000568364 888 ntTSL 5 BASIC21.09■□□□□ 0.97
CCER1Q8TC90 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC21.09■□□□□ 0.97
CCER1Q8TC90 AC133540.1-201ENST00000620845 1019 ntBASIC21.09■□□□□ 0.97
CCER1Q8TC90 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC21.09■□□□□ 0.97
CCER1Q8TC90 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCER1Q8TC90 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CCER1Q8TC90 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCER1Q8TC90 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCER1Q8TC90 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCER1Q8TC90 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC21.09■□□□□ 0.97
CCER1Q8TC90 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCER1Q8TC90 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCER1Q8TC90 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CCER1Q8TC90 AC102953.2-201ENST00000609755 3026 ntBASIC21.09■□□□□ 0.97
CCER1Q8TC90 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCER1Q8TC90 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCER1Q8TC90 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC21.09■□□□□ 0.97
CCER1Q8TC90 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CCER1Q8TC90 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCER1Q8TC90 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CCER1Q8TC90 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCER1Q8TC90 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCER1Q8TC90 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCER1Q8TC90 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCER1Q8TC90 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCER1Q8TC90 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCER1Q8TC90 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC21.08■□□□□ 0.97
CCER1Q8TC90 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCER1Q8TC90 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCER1Q8TC90 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCER1Q8TC90 AC025183.3-201ENST00000623526 1482 ntBASIC21.08■□□□□ 0.97
CCER1Q8TC90 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC21.08■□□□□ 0.97
CCER1Q8TC90 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC21.08■□□□□ 0.97
CCER1Q8TC90 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC21.08■□□□□ 0.97
CCER1Q8TC90 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC21.08■□□□□ 0.97
CCER1Q8TC90 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCER1Q8TC90 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCER1Q8TC90 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCER1Q8TC90 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC21.08■□□□□ 0.97
CCER1Q8TC90 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCER1Q8TC90 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCER1Q8TC90 HIST1H2BPS3-201ENST00000419683 341 ntBASIC21.08■□□□□ 0.97
CCER1Q8TC90 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCER1Q8TC90 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC21.08■□□□□ 0.97
CCER1Q8TC90 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CCER1Q8TC90 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
CCER1Q8TC90 AC023310.1-201ENST00000554836 735 ntBASIC21.08■□□□□ 0.97
CCER1Q8TC90 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC21.08■□□□□ 0.97
CCER1Q8TC90 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC21.08■□□□□ 0.97
CCER1Q8TC90 DDX5-235ENST00000630471 473 ntTSL 4 BASIC21.08■□□□□ 0.97
CCER1Q8TC90 AL358472.5-202ENST00000641448 1267 ntBASIC21.08■□□□□ 0.97
CCER1Q8TC90 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC21.08■□□□□ 0.96
CCER1Q8TC90 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCER1Q8TC90 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC21.08■□□□□ 0.96
CCER1Q8TC90 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
CCER1Q8TC90 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CCER1Q8TC90 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCER1Q8TC90 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCER1Q8TC90 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCER1Q8TC90 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
CCER1Q8TC90 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC21.08■□□□□ 0.96
CCER1Q8TC90 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCER1Q8TC90 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCER1Q8TC90 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCER1Q8TC90 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CCER1Q8TC90 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CCER1Q8TC90 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms